Gene: Seita.J016200 (Setaria italica)

Overview top

Gene Identifier
Seita.J016200
Transcript Identifier
Seita.J016200.1
Gene Type
Coding gene
Location
scaffold_14 : 45771-46007 : positive

Family

Gene family
HOM04M000903
(150 genes in 24 species)
specific family
Subfamily
ORTHO04M009719
(22 genes in 15 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
idSeita.J016200.v2.2
pacid32706049
tidSeita.J016200.1.v2.2
tidSeita.J016200.1

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006412 IEAInterProtranslation
GO:0042256 IEAPLAZA Integrative Orthologymature ribosome assemblyATCG01120
GO:0042255 IEAPLAZA Integrative Orthologyribosome assemblyATCG01120

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003735 IEAInterProstructural constituent of ribosome
GO:0000287 IEAPLAZA Homology (enrichment)magnesium ion binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005622 IEAInterProintracellular
GO:0005840 IEAInterProribosome
GO:0042788 IEAPLAZA Integrative Orthologypolysomal ribosomeATCG01120
GO:0000312 IEAPLAZA Integrative Orthologyplastid small ribosomal subunitATCG01120
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneATCG01120
GO:0005774 IEAPLAZA Integrative Orthologyvacuolar membraneATCG01120
GO:0005829 IEAPLAZA Integrative OrthologycytosolATCG01120
GO:0022626 IEAPLAZA Integrative Orthologycytosolic ribosomeATCG01120
GO:0022627 IEAPLAZA Integrative Orthologycytosolic small ribosomal subunitATCG01120
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaATCG01120

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR000589Ribosomal protein S15
IPR005290Ribosomal protein S15, bacterial-type
IPR009068S15/NS1, RNA-binding

Mapman id Description
17.7.2.2.15.Protein biosynthesis.organelle machinery.plastidial ribosome.small ribosomal subunit proteome.component psRPS15
No SignalP domains detected for this gene.