Gene: Seita.J003700 (Setaria italica)

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Gene Identifier
Seita.J003700
Transcript Identifier
Seita.J003700.1
Gene Type
Coding gene
Location
scaffold_11 : 132001-136515 : negative

Family

Gene family
HOM04M000132
(677 genes in 28 species)
specific family
Subfamily
ORTHO04M000074
(640 genes in 28 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasSi020680m.g
ancestorIdentifierSi020680m.g.version2.1
ancestorIdentifierSi020680m.version2.1
idSeita.J003700.v2.2
pacid32701723
tidSeita.J003700.1.v2.2
tidSeita.J003700.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0034220 IEAPLAZA Integrative Orthologyion transmembrane transportAT1G05200
GO:0009611 IEAPLAZA Integrative Orthologyresponse to woundingAT1G05200
GO:0009845 IEAPLAZA Integrative Orthologyseed germinationAT2G32390
GO:0071230 IEAPLAZA Integrative Orthologycellular response to amino acid stimulusAT1G05200
GO:0071260 IEAPLAZA Integrative Orthologycellular response to mechanical stimulusAT1G05200
GO:0070584 IEAPLAZA Integrative Orthologymitochondrion morphogenesisAT2G32390
GO:0071311 IEAPLAZA Integrative Orthologycellular response to acetateAT1G05200
GO:0006816 IEAPLAZA Integrative Orthologycalcium ion transportAT1G05200
GO:0071215 IEAPLAZA Integrative Orthologycellular response to abscisic acid stimulusAT1G05200
GO:0019722 IEAPLAZA Integrative Orthologycalcium-mediated signalingAT1G05200
GO:0070417 IEAPLAZA Integrative Orthologycellular response to coldAT1G05200

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004970 IEAInterProionotropic glutamate receptor activity
GO:0015276 IEAPLAZA Integrative Orthologyligand-gated ion channel activityAT1G05200
GO:0008066 IEAPLAZA Integrative Orthologyglutamate receptor activityAT1G05200
GO:0005262 IEAPLAZA Integrative Orthologycalcium channel activityAT1G05200
GO:0005216 IEAPLAZA Integrative Orthologyion channel activityAT2G32390
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT1G05200

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020 IEAInterPromembrane
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT1G05200
GO:0009536 IEAPLAZA Integrative OrthologyplastidAT1G05200
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT2G32390
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT2G32400
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT2G32390

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001638Solute-binding protein family 3/N-terminal domain of MltF
IPR001828Receptor, ligand binding region
IPR001320Ionotropic glutamate receptor
IPR017103Ionotropic glutamate receptor, plant
IPR028082Periplasmic binding protein-like I

Mapman id Description
24.3.9.Solute transport.channels.ligand-gated cation channel (GLR)
No SignalP domains detected for this gene.