Gene: Seita.9G227400 (Setaria italica)

Overview top

Gene Identifier
Seita.9G227400
Transcript Identifier
Seita.9G227400.1
Gene Type
Coding gene
Location
scaffold_9 : 17170960-17174907 : negative

Family

Gene family
HOM04M000081
(1007 genes in 27 species)
specific family
Subfamily
ORTHO04M000278
(286 genes in 27 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasSi034020m.g
ancestorIdentifierSi034020m.g.version2.1
ancestorIdentifierSi034020m.version2.1
idSeita.9G227400.v2.2
pacid32691194
tidSeita.9G227400.1.v2.2
tidSeita.9G227400.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0030244 IEAInterProcellulose biosynthetic process
GO:0009832 IEAPLAZA Integrative Orthologyplant-type cell wall biogenesisAT5G44030
GO:0042742 IEAPLAZA Integrative Orthologydefense response to bacteriumAT5G44030
GO:0009867 IEAPLAZA Integrative Orthologyjasmonic acid mediated signaling pathwayAT5G44030
GO:0009834 IEAPLAZA Integrative Orthologyplant-type secondary cell wall biogenesisAT5G44030
GO:0050832 IEAPLAZA Integrative Orthologydefense response to fungusAT5G44030
GO:0009873 IEAPLAZA Integrative Orthologyethylene-activated signaling pathwayAT5G44030
GO:0009863 IEAPLAZA Integrative Orthologysalicylic acid mediated signaling pathwayAT5G44030
GO:0052386 IEAPLAZA Integrative Orthologycell wall thickeningAT5G44030

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016760 IEAInterProcellulose synthase (UDP-forming) activity
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G44030

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020 IEAInterPromembrane

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR029044Nucleotide-diphospho-sugar transferases
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR005150Cellulose synthase
IPR027934Cellulose synthase, RING-type zinc finger
IPR001841Zinc finger, RING-type

Mapman id Description
21.1.1.1.1.Cell wall organisation.cellulose.cellulose synthase complex (CSC).CSC components.catalytic component CesA
No SignalP domains detected for this gene.