Gene: Seita.9G156200 (Setaria italica)

Overview top

Gene Identifier
Seita.9G156200
Transcript Identifier
Seita.9G156200.1
Gene Type
Coding gene
Location
scaffold_9 : 10262027-10269345 : negative

Family

Gene family
HOM04M000521
(231 genes in 29 species)
specific family
Subfamily
ORTHO04M005585
(40 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasSi033950m.g
ancestorIdentifierSi033950m.g.version2.1
ancestorIdentifierSi033950m.version2.1
idSeita.9G156200.v2.2
pacid32687021
tidSeita.9G156200.1.v2.2
tidSeita.9G156200.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006351 IEAInterProtranscription, DNA-templated

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003899 IEAInterProDNA-directed 5'-3' RNA polymerase activity
GO:0032549 IEAInterProribonucleoside binding
GO:0003677 IEAInterProDNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005665 IEAPLAZA Integrative OrthologyDNA-directed RNA polymerase II, core complexAT4G21710
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT4G21710
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT4G21710

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR015712DNA-directed RNA polymerase, subunit 2
IPR007120DNA-directed RNA polymerase, subunit 2, domain 6
IPR007647RNA polymerase Rpb2, domain 5
IPR007645RNA polymerase Rpb2, domain 3
IPR007642RNA polymerase Rpb2, domain 2
IPR007646RNA polymerase Rpb2, domain 4
IPR007644RNA polymerase, beta subunit, protrusion
IPR007641RNA polymerase Rpb2, domain 7
IPR007121RNA polymerase, beta subunit, conserved site

Mapman id Description
15.1.2.2.RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol II catalytic components.subunit 2
No SignalP domains detected for this gene.