Gene: Seita.7G329000 (Setaria italica)

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Gene Identifier
Seita.7G329000
Transcript Identifier
Seita.7G329000.1
Gene Type
Coding gene
Location
scaffold_7 : 35622851-35625349 : positive

Family

Gene family
HOM04M000527
(227 genes in 27 species)
specific family
Subfamily
ORTHO04M004002
(49 genes in 26 species)
specific family
Duplication type
Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasSi010100m.g
ancestorIdentifierSi010100m.g.version2.1
ancestorIdentifierSi010100m.version2.1
idSeita.7G329000.v2.2
pacid32703084
tidSeita.7G329000.1.v2.2
tidSeita.7G329000.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010267 IEAPLAZA Integrative Orthologyproduction of ta-siRNAs involved in RNA interferenceAT1G09700
GO:0010305 IEAPLAZA Integrative Orthologyleaf vascular tissue pattern formationAT1G09700
GO:0035279 IEAPLAZA Integrative OrthologymRNA cleavage involved in gene silencing by miRNAAT1G09700
GO:0010589 IEAPLAZA Integrative Orthologyleaf proximal/distal pattern formationAT1G09700
GO:0009737 IEAPLAZA Integrative Orthologyresponse to abscisic acidAT1G09700
GO:0009733 IEAPLAZA Integrative Orthologyresponse to auxinAT1G09700
GO:0009735 IEAPLAZA Integrative Orthologyresponse to cytokininAT1G09700
GO:0035196 IEAPLAZA Integrative Orthologyproduction of miRNAs involved in gene silencing by miRNAAT1G09700
GO:0031054 IEAPLAZA Integrative Orthologypre-miRNA processingAT1G09700

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003725 IEAInterProdouble-stranded RNA binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT1G09700
GO:0035198 IEAPLAZA Integrative OrthologymiRNA bindingAT1G09700

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0010445 IEAPLAZA Integrative Orthologynuclear dicing bodyAT1G09700
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G09700
GO:0015030 IEAPLAZA Integrative OrthologyCajal bodyAT1G09700

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR031147Double-stranded RNA-binding protein
IPR014720Double-stranded RNA-binding domain

Mapman id Description
16.10.2.1.2.RNA processing.mRNA silencing.miRNA pathway.DCL1-HYL1 miRNA biogenesis complex.component HYL1
No SignalP domains detected for this gene.