Gene: Seita.7G088900 (Setaria italica)

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Gene Identifier
Seita.7G088900
Transcript Identifier
Seita.7G088900.2
Gene Type
Coding gene
Location
scaffold_7 : 19315640-19319435 : positive

Family

Gene family
HOM04M000721
(181 genes in 29 species)
specific family
Subfamily
ORTHO04M000710
(155 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasSi010167m.g
ancestorIdentifierSi010167m.g.version2.1
idSeita.7G088900.v2.2
pacid32704535
tidSeita.7G088900.2.v2.2
tidSeita.7G088900.2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016575 IEAInterProhistone deacetylation
GO:1990619 IEAPLAZA Integrative Orthologyhistone H3-K9 deacetylationAT3G44680
GO:1900055 IEAPLAZA Integrative Orthologyregulation of leaf senescenceAT3G44680
GO:0010187 IEAPLAZA Integrative Orthologynegative regulation of seed germinationAT3G44680

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004407 IEAInterProhistone deacetylase activity
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT3G44680
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT3G44680

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR023801Histone deacetylase domain
IPR000286Histone deacetylase superfamily
IPR003084Histone deacetylase

Mapman id Description
12.3.2.1.1.Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase
No SignalP domains detected for this gene.