Gene: Seita.6G185200 (Setaria italica)

Overview top

Gene Identifier
Seita.6G185200
Transcript Identifier
Seita.6G185200.1
Gene Type
Coding gene
Location
scaffold_6 : 30901934-30909015 : negative

Family

Gene family
HOM04M000265
(374 genes in 29 species)
specific family
Subfamily
ORTHO04M000853
(135 genes in 28 species)
specific family
Duplication type
Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasSi013189m.g
ancestorIdentifierSi013189m.g.version2.1
ancestorIdentifierSi013189m.version2.1
idSeita.6G185200.v2.2
pacid32699665
tidSeita.6G185200.1.v2.2
tidSeita.6G185200.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016579 IEAInterProprotein deubiquitination
GO:0006511 IEAInterProubiquitin-dependent protein catabolic process
GO:0008283 IEAPLAZA Integrative Orthologycell proliferationAT4G24560
GO:0048364 IEAPLAZA Integrative Orthologyroot developmentAT4G24560
GO:0009651 IEAPLAZA Integrative Orthologyresponse to salt stressAT4G24560
GO:1901000 IEAPLAZA Integrative Orthologyregulation of response to salt stressAT4G24560
GO:0009908 IEAPLAZA Integrative Orthologyflower developmentAT4G24560
GO:0048367 IEAPLAZA Integrative Orthologyshoot system developmentAT4G24560
GO:0048366 IEAPLAZA Integrative Orthologyleaf developmentAT4G24560

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0036459 IEAInterProthiol-dependent ubiquitinyl hydrolase activity
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT4G24560

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR002893Zinc finger, MYND-type
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR018200Ubiquitin specific protease, conserved site
IPR028889Ubiquitin specific protease domain

Mapman id Description
19.2.3.1.1.7.Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.UBP deubiquitinase activities.deubiquitinase (UBP15-21)
No SignalP domains detected for this gene.