Gene: Seita.5G238500 (Setaria italica)

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Gene Identifier
Seita.5G238500
Transcript Identifier
Seita.5G238500.1
Gene Type
Coding gene
Location
scaffold_5 : 30196852-30197127 : positive

Family

Gene family
HOM04M000097
(875 genes in 29 species)
specific family
Subfamily
ORTHO04M000746
(148 genes in 24 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
idSeita.5G238500.v2.2
pacid32685943
tidSeita.5G238500.1.v2.2
tidSeita.5G238500.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010114 IEAPLAZA Integrative Orthologyresponse to red lightAT2G21650
GO:0042742 IEAPLAZA Integrative Orthologydefense response to bacteriumAT2G21650
GO:0009630 IEAPLAZA Integrative OrthologygravitropismAT2G21650
GO:0006355 IEAPLAZA Integrative Orthologyregulation of transcription, DNA-templatedAT1G75250
GO:0009793 IEAPLAZA Integrative Orthologyembryo development ending in seed dormancyAT2G21650
GO:0009651 IEAPLAZA Integrative Orthologyresponse to salt stressAT2G21650
GO:0010043 IEAPLAZA Integrative Orthologyresponse to zinc ionAT2G21650

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0046872 IEAPLAZA Integrative Orthologymetal ion bindingAT2G21650
GO:0005507 IEAPLAZA Integrative Orthologycopper ion bindingAT2G21650

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT2G21650

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001005SANT/Myb domain
IPR017884SANT domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.2.2.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB-related)
No SignalP domains detected for this gene.