Gene: Seita.5G112600 (Setaria italica)

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Gene Identifier
Seita.5G112600
Transcript Identifier
Seita.5G112600.1
Gene Type
Coding gene
Location
scaffold_5 : 9410744-9415570 : negative

Family

Gene family
HOM04M001901
(81 genes in 28 species)
specific family
Subfamily
ORTHO04M007370
(34 genes in 28 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasSi000223m.g
ancestorIdentifierSi000223m.g.version2.1
ancestorIdentifierSi000223m.version2.1
idSeita.5G112600.v2.2
pacid32681578
tidSeita.5G112600.1.v2.2
tidSeita.5G112600.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEAInterProregulation of transcription, DNA-templated
GO:2000037 IEAPLAZA Integrative Orthologyregulation of stomatal complex patterningAT5G05660
GO:0042335 IEAPLAZA Integrative Orthologycuticle developmentAT5G05660
GO:0010310 IEAPLAZA Integrative Orthologyregulation of hydrogen peroxide metabolic processAT5G05660
GO:0007623 IEAPLAZA Integrative Orthologycircadian rhythmAT5G05660
GO:0045893 IEAPLAZA Integrative Orthologypositive regulation of transcription, DNA-templatedAT5G05660
GO:0009908 IEAPLAZA Integrative Orthologyflower developmentAT5G05660
GO:0045892 IEAPLAZA Integrative Orthologynegative regulation of transcription, DNA-templatedAT5G05660
GO:0009651 IEAPLAZA Integrative Orthologyresponse to salt stressAT5G05660

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700 IEAInterProtranscription factor activity, sequence-specific DNA binding
GO:0008270 IEAInterProzinc ion binding
GO:0000987 IEAPLAZA Integrative Orthologycore promoter proximal region sequence-specific DNA bindingAT5G05660

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAInterPronucleus

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR034078Transcription factor NFX1 family
IPR000967Zinc finger, NF-X1-type
IPR019786Zinc finger, PHD-type, conserved site
IPR001841Zinc finger, RING-type

Mapman id Description
15.5.53.6.RNA biosynthesis.transcriptional regulation.transcriptional repression.transcriptional repressor (NF-X1)
No SignalP domains detected for this gene.