Gene: Seita.5G061700 (Setaria italica)

Overview top

Gene Identifier
Seita.5G061700
Transcript Identifier
Seita.5G061700.1
Gene Type
Coding gene
Location
scaffold_5 : 5407577-5409004 : negative

Family

Gene family
HOM04M000336
(323 genes in 27 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
idSeita.5G061700.v2.2
pacid32685861
tidSeita.5G061700.1.v2.2
tidSeita.5G061700.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0080092 IEAPLAZA Tree-based Orthologyregulation of pollen tube growthAT4G38430
GO:0048364 IEAPLAZA Tree-based Orthologyroot developmentAT1G52240
GO:0080147 IEAPLAZA Tree-based Orthologyroot hair cell developmentAT1G52240
GO:0009664 IEAPLAZA Tree-based Orthologyplant-type cell wall organizationAT2G45890
GO:0048767 IEAPLAZA Tree-based Orthologyroot hair elongationAT2G45890
GO:0009793 IEAPLAZA Tree-based Orthologyembryo development ending in seed dormancyAT1G79860
GO:0009860 IEAPLAZA Tree-based Orthologypollen tube growthAT4G38430

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005089 IEAInterProRho guanyl-nucleotide exchange factor activity
GO:0005515 IEAPLAZA Tree-based Orthologyprotein bindingAT2G45890
GO:0005085 IEAPLAZA Tree-based Orthologyguanyl-nucleotide exchange factor activityAT3G24620
GO:0042802 IEAPLAZA Tree-based Orthologyidentical protein bindingAT3G24620

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0090406 IEAPLAZA Tree-based Orthologypollen tubeAT1G79860
GO:0016324 IEAPLAZA Tree-based Orthologyapical plasma membraneAT4G38430
GO:0005829 IEAPLAZA Tree-based OrthologycytosolAT5G02010
GO:0005737 IEAPLAZA Tree-based OrthologycytoplasmAT1G52240
GO:0005634 IEAPLAZA Tree-based OrthologynucleusAT1G52240
GO:0005886 IEAPLAZA Tree-based Orthologyplasma membraneAT2G45890
GO:0009531 IEAPLAZA Tree-based Orthologysecondary cell wallAT2G45890

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR005512PRONE domain
IPR011009Protein kinase-like domain

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.