Gene: Seita.3G350800 (Setaria italica)

Overview top

Gene Identifier
Seita.3G350800
Transcript Identifier
Seita.3G350800.1
Gene Type
Coding gene
Location
scaffold_3 : 45041587-45044061 : positive

Family

Gene family
HOM04M000010
(3187 genes in 28 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasSi024786m.g
ancestorIdentifierSi024786m.g.version2.1
ancestorIdentifierSi024786m.version2.1
idSeita.3G350800.v2.2
pacid32711904
tidSeita.3G350800.1.v2.2
tidSeita.3G350800.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:2000652 IEAPLAZA Integrative Orthologyregulation of secondary cell wall biogenesisAT3G08500
GO:1901348 IEAPLAZA Integrative Orthologypositive regulation of secondary cell wall biogenesisAT5G12870
GO:0009834 IEAPLAZA Integrative Orthologyplant-type secondary cell wall biogenesisAT5G12870
GO:0050832 IEAPLAZA Integrative Orthologydefense response to fungusAT5G12870
GO:0009751 IEAPLAZA Integrative Orthologyresponse to salicylic acidAT5G12870
GO:0045893 IEAPLAZA Integrative Orthologypositive regulation of transcription, DNA-templatedAT3G08500

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT3G08500
GO:0003700 IEAPLAZA Integrative Orthologytranscription factor activity, sequence-specific DNA bindingAT5G12870

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT5G12870

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001005SANT/Myb domain
IPR017930Myb domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.2.1.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)
No SignalP domains detected for this gene.