Gene: Seita.3G340800 (Setaria italica)

Overview top

Gene Identifier
Seita.3G340800
Transcript Identifier
Seita.3G340800.1
Gene Type
Coding gene
Location
scaffold_3 : 43740561-43743979 : positive

Family

Gene family
HOM04M000281
(366 genes in 27 species)
specific family
Subfamily
ORTHO04M009894
(20 genes in 15 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasSi021377m.g
ancestorIdentifierSi021377m.g.version2.1
ancestorIdentifierSi021377m.version2.1
idSeita.3G340800.v2.2
pacid32711505
tidSeita.3G340800.1.v2.2
tidSeita.3G340800.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006950 IEAInterProresponse to stress
GO:0010224 IEAPLAZA Integrative Orthologyresponse to UV-BAT5G26920
GO:0071219 IEAPLAZA Integrative Orthologycellular response to molecule of bacterial originAT5G26920
GO:0010112 IEAPLAZA Integrative Orthologyregulation of systemic acquired resistanceAT5G26920
GO:0071456 IEAPLAZA Integrative Orthologycellular response to hypoxiaAT5G26920
GO:0002229 IEAPLAZA Integrative Orthologydefense response to oomycetesAT5G26920
GO:0009617 IEAPLAZA Integrative Orthologyresponse to bacteriumAT5G26920
GO:0002237 IEAPLAZA Integrative Orthologyresponse to molecule of bacterial originAT5G26920
GO:0009816 IEAPLAZA Integrative Orthologydefense response to bacterium, incompatible interactionAT5G26920
GO:1900426 IEAPLAZA Tree-based Orthologypositive regulation of defense response to bacteriumAT1G73805
GO:0009789 IEAPLAZA Integrative Orthologypositive regulation of abscisic acid-activated signaling pathwayAT5G26920
GO:0042742 IEAPLAZA Integrative Orthologydefense response to bacteriumAT5G26920
GO:1902478 IEAPLAZA Tree-based Orthologynegative regulation of defense response to bacterium, incompatible interactionAT5G62570
GO:0009620 IEAPLAZA Integrative Orthologyresponse to fungusAT5G26920
GO:0009697 IEAPLAZA Integrative Orthologysalicylic acid biosynthetic processAT5G26920
GO:0006355 IEAPLAZA Integrative Orthologyregulation of transcription, DNA-templatedAT5G26920
GO:1902584 IEAPLAZA Integrative Orthologypositive regulation of response to water deprivationAT5G26920
GO:0080142 IEAPLAZA Integrative Orthologyregulation of salicylic acid biosynthetic processAT5G26920

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005516 IEAInterProcalmodulin binding
GO:0003700 IEAPLAZA Integrative Orthologytranscription factor activity, sequence-specific DNA bindingAT5G26920
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT5G26920

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT5G26920

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR012416CALMODULIN-BINDING PROTEIN60

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.