Gene: Seita.3G331100 (Setaria italica)

Overview top

Gene Identifier
Seita.3G331100
Transcript Identifier
Seita.3G331100.1
Gene Type
Coding gene
Location
scaffold_3 : 42359292-42360222 : positive

Family

Gene family
HOM04M000010
(3187 genes in 28 species)
specific family
Subfamily
ORTHO04M001655
(89 genes in 24 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasSi023104m.g
ancestorIdentifierSi023104m.g.version2.1
ancestorIdentifierSi023104m.version2.1
idSeita.3G331100.v2.2
pacid32711629
tidSeita.3G331100.1.v2.2
tidSeita.3G331100.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009646 IEAPLAZA Integrative Orthologyresponse to absence of lightAT3G53200
GO:0010200 IEAPLAZA Integrative Orthologyresponse to chitinAT3G53200
GO:0009751 IEAPLAZA Integrative Orthologyresponse to salicylic acidAT3G46130
GO:0006355 IEAPLAZA Integrative Orthologyregulation of transcription, DNA-templatedAT3G46130

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT3G46130

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001005SANT/Myb domain
IPR017930Myb domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.2.1.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)
No SignalP domains detected for this gene.