Gene: Seita.3G170000 (Setaria italica)

Overview top

Gene Identifier
Seita.3G170000
Transcript Identifier
Seita.3G170000.1
Gene Type
Coding gene
Location
scaffold_3 : 12528443-12531091 : positive

Family

Gene family
HOM04M000731
(178 genes in 29 species)
specific family
Subfamily
ORTHO04M002436
(70 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasSi023216m.g
ancestorIdentifierSi023216m.g.version2.1
ancestorIdentifierSi023216m.version2.1
idSeita.3G170000.v2.2
pacid32714224
tidSeita.3G170000.1.v2.2
tidSeita.3G170000.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006621 IEAInterProprotein retention in ER lumen
GO:0098542 IEAPLAZA Integrative Orthologydefense response to other organismAT1G29330
GO:0042742 IEAPLAZA Integrative Orthologydefense response to bacteriumAT1G29330
GO:0046686 IEAPLAZA Integrative Orthologyresponse to cadmium ionAT1G29330
GO:0050832 IEAPLAZA Integrative Orthologydefense response to fungusAT1G29330
GO:0009408 IEAPLAZA Integrative Orthologyresponse to heatAT1G29330
GO:0009409 IEAPLAZA Integrative Orthologyresponse to coldAT1G29330
GO:0009615 IEAPLAZA Integrative Orthologyresponse to virusAT1G29330
GO:0090332 IEAPLAZA Integrative Orthologystomatal closureAT1G29330
GO:0010187 IEAPLAZA Integrative Orthologynegative regulation of seed germinationAT1G29330

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046923 IEAInterProER retention sequence binding
GO:0005046 IEAPLAZA Integrative OrthologyKDEL sequence bindingAT1G29330
GO:0002020 IEAPLAZA Integrative Orthologyprotease bindingAT1G29330

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016021 IEAInterProintegral component of membrane
GO:0016020 IEAPLAZA Integrative OrthologymembraneAT1G29330
GO:0005618 IEAPLAZA Integrative Orthologycell wallAT1G29330
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT1G29330
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G29330
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT1G29330
GO:0005783 IEAPLAZA Integrative Orthologyendoplasmic reticulumAT1G29330
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT1G29330
GO:0048046 IEAPLAZA Integrative OrthologyapoplastAT1G29330
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT1G29330
GO:0005801 IEAPLAZA Integrative Orthologycis-Golgi networkAT1G29330
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT1G29330
GO:0005623 IEAPLAZA Integrative OrthologycellAT1G29330
GO:0005774 IEAPLAZA Integrative Orthologyvacuolar membraneAT1G29330
GO:0005730 IEAPLAZA Integrative OrthologynucleolusAT1G29330
GO:0005794 IEAPLAZA Integrative OrthologyGolgi apparatusAT1G29330
GO:0022626 IEAPLAZA Integrative Orthologycytosolic ribosomeAT1G29330

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000133ER lumen protein retaining receptor

Mapman id Description
22.3.5.3.Vesicle trafficking.Coat protein I (COPI) coatomer machinery.trafficking regulation.K/HDEL-signature receptor (ERD2)
No SignalP domains detected for this gene.