Gene: Seita.3G147800 (Setaria italica)

Overview top

Gene Identifier
Seita.3G147800
Transcript Identifier
Seita.3G147800.1
Gene Type
Coding gene
Location
scaffold_3 : 10641953-10644549 : positive

Family

Gene family
HOM04M004240
(43 genes in 28 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasSi022814m.g
ancestorIdentifierSi022814m.g.version2.1
ancestorIdentifierSi022814m.version2.1
idSeita.3G147800.v2.2
pacid32712169
tidSeita.3G147800.1.v2.2
tidSeita.3G147800.1

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0033468 IEAPLAZA Integrative OrthologyCMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic processAT1G53000
GO:0009555 IEAPLAZA Integrative Orthologypollen developmentAT1G53000
GO:0009860 IEAPLAZA Integrative Orthologypollen tube growthAT1G53000

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008690 IEAInterPro3-deoxy-manno-octulosonate cytidylyltransferase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737 IEAInterProcytoplasm
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT1G53000
GO:0031307 IEAPLAZA Integrative Orthologyintegral component of mitochondrial outer membraneAT1G53000

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR0045283-deoxy-D-manno-octulosonate cytidylyltransferase
IPR029044Nucleotide-diphospho-sugar transferases
IPR003329Acylneuraminate cytidylyltransferase

Mapman id Description
21.3.3.1.2.3.Cell wall organisation.pectin.rhamnogalacturonan II.biosynthesis.2-keto-3-deoxymanno-octulosonic acid (KDO) biosynthesis.CMP-KDO synthetase
No SignalP domains detected for this gene.