Gene: Seita.3G122600 (Setaria italica)

Overview top

Gene Identifier
Seita.3G122600
Transcript Identifier
Seita.3G122600.1
Gene Type
Coding gene
Location
scaffold_3 : 8272372-8275960 : positive

Family

Gene family
HOM04M000243
(404 genes in 29 species)
specific family
Subfamily
ORTHO04M006211
(37 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasSi022291m.g
ancestorIdentifierSi022291m.g.version2.1
ancestorIdentifierSi022291m.version2.1
idSeita.3G122600.v2.2
pacid32712730
tidSeita.3G122600.1.v2.2
tidSeita.3G122600.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006508 IEAInterProproteolysis

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004252 IEAInterProserine-type endopeptidase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009532 IEAPLAZA Integrative Orthologyplastid stromaAT1G49970
GO:0009840 IEAPLAZA Integrative Orthologychloroplastic endopeptidase Clp complexAT1G49970
GO:0009941 IEAPLAZA Integrative Orthologychloroplast envelopeAT1G49970
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT1G49970
GO:0009534 IEAPLAZA Integrative Orthologychloroplast thylakoidAT1G49970
GO:0009570 IEAPLAZA Integrative Orthologychloroplast stromaAT1G49970

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR001907ATP-dependent Clp protease proteolytic subunit
IPR029045ClpP/crotonase-like domain

Mapman id Description
19.4.2.9.2.Protein homeostasis.proteolysis.serine-type peptidase activities.chloroplast Clp-type protease complex.non-proteolytic core component ClpR
No SignalP domains detected for this gene.