Gene: Seita.3G122400 (Setaria italica)

Overview top

Gene Identifier
Seita.3G122400
Transcript Identifier
Seita.3G122400.1
Gene Type
Coding gene
Location
scaffold_3 : 8254832-8257468 : negative

Family

Gene family
HOM04M000516
(233 genes in 29 species)
specific family
Subfamily
ORTHO04M000413
(222 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasSi022947m.g
ancestorIdentifierSi022947m.g.version2.1
ancestorIdentifierSi022947m.version2.1
idSeita.3G122400.v2.2
pacid32711087
tidSeita.3G122400.1.v2.2
tidSeita.3G122400.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0055114 IEAInterProoxidation-reduction process
GO:0070483 IEAPLAZA Integrative Orthologydetection of hypoxiaAT5G39890
GO:0009061 IEAPLAZA Integrative Orthologyanaerobic respirationAT5G15120
GO:0018171 IEAPLAZA Integrative Orthologypeptidyl-cysteine oxidationAT5G39890
GO:0001666 IEAPLAZA Integrative Orthologyresponse to hypoxiaAT5G39890

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016702 IEAInterProoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT5G39890
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT5G39890

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR014710RmlC-like jelly roll fold
IPR012864Cysteine oxygenase/2-aminoethanethiol dioxygenase
IPR011051RmlC-like cupin domain

Mapman id Description
19.2.1.2.1.1.Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Arg/N-degron pathway.N-terminal modification.cysteine oxidase (PCO)
No SignalP domains detected for this gene.