Gene: Seita.2G316600 (Setaria italica)

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Gene Identifier
Seita.2G316600
Transcript Identifier
Seita.2G316600.1
Gene Type
Coding gene
Location
scaffold_2 : 40669004-40680103 : positive

Family

Gene family
HOM04M000657
(193 genes in 29 species)
specific family
Duplication type
Tandem duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasSi029133m.g
ancestorIdentifierSi029133m.g.version2.1
idSeita.2G316600.v2.2
pacid32723160
tidSeita.2G316600.1.v2.2
tidSeita.2G316600.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006298 IEAInterPromismatch repair
GO:0045143 IEAPLAZA Integrative Orthologyhomologous chromosome segregationAT4G17380
GO:0010777 IEAPLAZA Integrative Orthologymeiotic mismatch repair involved in reciprocal meiotic recombinationAT4G17380
GO:0007129 IEAPLAZA Integrative OrthologysynapsisAT4G17380

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005524 IEAInterProATP binding
GO:0030983 IEAInterPromismatched DNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0043073 IEAPLAZA Integrative Orthologygerm cell nucleusAT4G17380
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT4G17380
GO:0000794 IEAPLAZA Integrative Orthologycondensed nuclear chromosomeAT4G17380

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR007860DNA mismatch repair protein MutS, connector domain
IPR000432DNA mismatch repair protein MutS, C-terminal
IPR007696DNA mismatch repair protein MutS, core
IPR007861DNA mismatch repair protein MutS, clamp
IPR011184DNA mismatch repair MutS
IPR027417P-loop containing nucleoside triphosphate hydrolase

Mapman id Description
13.3.6.5.1.2.1.Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.class I interference-sensitive crossover pathway.MSH4-MSH5 Holliday junction stabilizing heterodimer.component MSH4
No SignalP domains detected for this gene.