PLAZA 4.0 Monocots gene overview : SMO340G0274

Gene: SMO340G0274 (Selaginella moellendorffii)

Overview

Gene Identifier: SMO340G0274
Transcript Identifier: SMO340G0274.1
Gene Type: Coding gene
Location: scaffold_9 : 2860955-2861507 : positive

Family

Gene family: HOM04M009651
(11 genes in 5 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value
alias	e_gw1.9.124.1
id	88969.v1
name	88969
pacid	15410359
tid	88969.v1.91

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

Browse

...the gene in IGV.js, a genome browser

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0007018	IEA	PLAZA Homology (enrichment)	microtubule-based movement

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005868	IEA	PLAZA Homology (enrichment)	cytoplasmic dynein complex

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR004942	Roadblock/LAMTOR2 domain

Mapman id	Description
35.2	not assigned.not annotated

No SignalP domains detected for this gene.