Gene: SMO271G0143 (Selaginella moellendorffii)

Overview top

Gene Identifier
SMO271G0143
Transcript Identifier
SMO271G0143.1
Gene Type
Coding gene
Location
scaffold_64 : 178872-179492 : positive

Family

Gene family
HOM04M000012
(2892 genes in 29 species)
specific family
Duplication type
Tandem duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliase_gw1.64.374.1
id121181.v1
name121181
pacid15415477
tid121181.v1.91

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016567 IEAPLAZA Integrative Orthologyprotein ubiquitinationAT5G10380
GO:0012501 IEAPLAZA Integrative Orthologyprogrammed cell deathAT5G10380
GO:0010200 IEAPLAZA Integrative Orthologyresponse to chitinAT5G10380
GO:0009617 IEAPLAZA Integrative Orthologyresponse to bacteriumAT5G10380
GO:0009965 IEAPLAZA Integrative Orthologyleaf morphogenesisAT3G62690
GO:0080167 IEAPLAZA Integrative Orthologyresponse to karrikinAT3G03550
GO:0051865 IEAPLAZA Integrative Orthologyprotein autoubiquitinationAT5G10380
GO:0010015 IEAPLAZA Integrative Orthologyroot morphogenesisAT3G62690
GO:0002238 IEAPLAZA Integrative Orthologyresponse to molecule of fungal originAT5G10380
GO:0006913 IEAPLAZA Integrative Orthologynucleocytoplasmic transportAT3G62690
GO:0009735 IEAPLAZA Integrative Orthologyresponse to cytokininAT3G62690
GO:0009955 IEAPLAZA Integrative Orthologyadaxial/abaxial pattern specificationAT3G62690
GO:0042256 IEAPLAZA Integrative Orthologymature ribosome assemblyAT3G62690
GO:0042255 IEAPLAZA Integrative Orthologyribosome assemblyAT3G62690
GO:0043068 IEAPLAZA Integrative Orthologypositive regulation of programmed cell deathAT5G10380
GO:0006461 IEAPLAZA Integrative Orthologyprotein complex assemblyAT3G62690
GO:0008283 IEAPLAZA Integrative Orthologycell proliferationAT3G62690

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003735 IEAPLAZA Integrative Orthologystructural constituent of ribosomeAT3G62690
GO:0004842 IEAPLAZA Integrative Orthologyubiquitin-protein transferase activityAT5G10380
GO:0008097 IEAPLAZA Integrative Orthology5S rRNA bindingAT3G62690

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016021 IEAUniProtintegral component of membrane
GO:0016020 IEAPLAZA Integrative OrthologymembraneAT3G62690
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT3G62690
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT3G62690
GO:0042788 IEAPLAZA Integrative Orthologypolysomal ribosomeAT3G62690
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT3G62690
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT3G62690
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT3G62690
GO:0005773 IEAPLAZA Integrative OrthologyvacuoleAT3G62690
GO:0005730 IEAPLAZA Integrative OrthologynucleolusAT3G62690
GO:0022625 IEAPLAZA Integrative Orthologycytosolic large ribosomal subunitAT3G62690
GO:0022626 IEAPLAZA Integrative Orthologycytosolic ribosomeAT3G62690

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type

Mapman id Description
19.2.2.1.5.3.3.Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class E3 ligase
No SignalP domains detected for this gene.