Gene: SMO245G0002 (Selaginella moellendorffii)

Overview top

Gene Identifier
SMO245G0002
Transcript Identifier
SMO245G0002.1
Gene Type
Coding gene
Location
scaffold_111 : 98951-101073 : negative

Family

Gene family
HOM04M000093
(903 genes in 29 species)
specific family
Subfamily
ORTHO04M000040
(877 genes in 29 species)
specific family
Duplication type
Tandem duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasfgenesh2_pg.C_scaffold_111000008
id429122.v1
name429122
pacid15414651
tid429122.v1.91

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEAInterProregulation of transcription, DNA-templated
GO:0010200 IEAPLAZA Integrative Orthologyresponse to chitinAT1G51700
GO:0071462 IEAPLAZA Integrative Orthologycellular response to water stimulusAT2G46590
GO:0048510 IEAPLAZA Integrative Orthologyregulation of timing of transition from vegetative to reproductive phaseAT5G39660
GO:0048825 IEAPLAZA Integrative Orthologycotyledon developmentAT4G21030
GO:0003002 IEAPLAZA Integrative OrthologyregionalizationAT1G07640
GO:0009625 IEAPLAZA Integrative Orthologyresponse to insectAT1G07640
GO:1902066 IEAPLAZA Integrative Orthologyregulation of cell wall pectin metabolic processAT5G65590
GO:2000032 IEAPLAZA Integrative Orthologyregulation of secondary shoot formationAT4G21030
GO:0010052 IEAPLAZA Integrative Orthologyguard cell differentiationAT5G65590
GO:0010118 IEAPLAZA Integrative Orthologystomatal movementAT5G65590
GO:0010372 IEAPLAZA Integrative Orthologypositive regulation of gibberellin biosynthetic processAT2G46590
GO:0010439 IEAPLAZA Integrative Orthologyregulation of glucosinolate biosynthetic processAT1G07640
GO:0009409 IEAPLAZA Integrative Orthologyresponse to coldAT2G46590
GO:0009414 IEAPLAZA Integrative Orthologyresponse to water deprivationAT3G47500
GO:0009733 IEAPLAZA Integrative Orthologyresponse to auxinAT3G50410
GO:0009416 IEAPLAZA Integrative Orthologyresponse to light stimulusAT2G46590
GO:0009658 IEAPLAZA Integrative Orthologychloroplast organizationAT5G62430
GO:1902455 IEAPLAZA Integrative Orthologynegative regulation of stem cell population maintenanceAT2G34140
GO:0045787 IEAPLAZA Integrative Orthologypositive regulation of cell cycleAT3G50410
GO:0009611 IEAPLAZA Integrative Orthologyresponse to woundingAT1G07640
GO:0010161 IEAPLAZA Integrative Orthologyred light signaling pathwayAT2G46590
GO:0010087 IEAPLAZA Integrative Orthologyphloem or xylem histogenesisAT5G62940
GO:0010067 IEAPLAZA Integrative Orthologyprocambium histogenesisAT5G62940
GO:0010227 IEAPLAZA Integrative Orthologyfloral organ abscissionAT4G38000
GO:0009639 IEAPLAZA Integrative Orthologyresponse to red or far red lightAT3G61850
GO:0009845 IEAPLAZA Integrative Orthologyseed germinationAT3G61850
GO:0042545 IEAPLAZA Integrative Orthologycell wall modificationAT3G50410
GO:0009640 IEAPLAZA Integrative OrthologyphotomorphogenesisAT3G55370
GO:0010154 IEAPLAZA Integrative Orthologyfruit developmentAT4G21050
GO:0010030 IEAPLAZA Integrative Orthologypositive regulation of seed germinationAT2G46590
GO:0010214 IEAPLAZA Integrative Orthologyseed coat developmentAT1G29160
GO:0045893 IEAPLAZA Integrative Orthologypositive regulation of transcription, DNA-templatedAT3G50410
GO:0045892 IEAPLAZA Integrative Orthologynegative regulation of transcription, DNA-templatedAT5G62430
GO:0009704 IEAPLAZA Integrative Orthologyde-etiolationAT5G62430
GO:0008219 IEAPLAZA Integrative Orthologycell deathAT5G62430
GO:0071491 IEAPLAZA Integrative Orthologycellular response to red lightAT2G46590
GO:0048364 IEAPLAZA Integrative Orthologyroot developmentAT5G60200
GO:0048359 IEAPLAZA Integrative Orthologymucilage metabolic process involved in seed coat developmentAT4G21030
GO:0009751 IEAPLAZA Integrative Orthologyresponse to salicylic acidAT3G50410
GO:1904216 IEAPLAZA Integrative Orthologypositive regulation of protein import into chloroplast stromaAT5G62430
GO:0009753 IEAPLAZA Integrative Orthologyresponse to jasmonic acidAT1G07640
GO:0009793 IEAPLAZA Integrative Orthologyembryo development ending in seed dormancyAT5G62430

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0003682 IEAPLAZA Integrative Orthologychromatin bindingAT3G61850
GO:0044183 IEAPLAZA Integrative Orthologyprotein binding involved in protein foldingAT5G62430
GO:0003700 IEAPLAZA Integrative Orthologytranscription factor activity, sequence-specific DNA bindingAT5G62430
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT2G37590
GO:0044212 IEAPLAZA Integrative Orthologytranscription regulatory region DNA bindingAT2G37590
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G39660
GO:0000976 IEAPLAZA Integrative Orthologytranscription regulatory region sequence-specific DNA bindingAT5G66940

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0055035 IEAPLAZA Integrative Orthologyplastid thylakoid membraneAT5G62430
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT5G62430
GO:0009941 IEAPLAZA Integrative Orthologychloroplast envelopeAT5G62430
GO:0005768 IEAPLAZA Integrative OrthologyendosomeAT3G47500
GO:0005802 IEAPLAZA Integrative Orthologytrans-Golgi networkAT3G47500
GO:0009536 IEAPLAZA Integrative OrthologyplastidAT5G62430
GO:0005730 IEAPLAZA Integrative OrthologynucleolusAT2G28510
GO:0009534 IEAPLAZA Integrative Orthologychloroplast thylakoidAT5G62430
GO:0009570 IEAPLAZA Integrative Orthologychloroplast stromaAT5G62430
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT2G37590
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT3G47500
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT5G62430
GO:0009706 IEAPLAZA Integrative Orthologychloroplast inner membraneAT5G62430
GO:0005794 IEAPLAZA Integrative OrthologyGolgi apparatusAT3G47500

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003851Zinc finger, Dof-type

Mapman id Description
15.5.1.5.RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (DOF)
No SignalP domains detected for this gene.