Gene: SMO028G0005 (Selaginella moellendorffii)

Overview top

Gene Identifier
SMO028G0005
Transcript Identifier
SMO028G0005.1
Gene Type
Coding gene
Location
scaffold_323 : 9596-10285 : positive

Family

Gene family
HOM04M000113
(759 genes in 29 species)
specific family
Subfamily
ORTHO04M000059
(702 genes in 29 species)
specific family
Duplication type
Tandem duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliase_gw1.323.5.1
id138728.v1
name138728
pacid15402793
tid138728.v1.91

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016567 IEAPLAZA Integrative Orthologyprotein ubiquitinationAT2G35635
GO:0010224 IEAPLAZA Integrative Orthologyresponse to UV-BAT2G35635
GO:0006511 IEAPLAZA Integrative Orthologyubiquitin-dependent protein catabolic processAT2G35635
GO:0007568 IEAPLAZA Integrative OrthologyagingAT4G05320
GO:0045116 IEAPLAZA Integrative Orthologyprotein neddylationAT2G35635
GO:0009733 IEAPLAZA Integrative Orthologyresponse to auxinAT2G35635
GO:0009735 IEAPLAZA Integrative Orthologyresponse to cytokininAT5G37640
GO:0009751 IEAPLAZA Integrative Orthologyresponse to salicylic acidAT2G35635
GO:0042256 IEAPLAZA Integrative Orthologymature ribosome assemblyAT2G35635
GO:0006464 IEAPLAZA Integrative Orthologycellular protein modification processAT2G35635
GO:0009693 IEAPLAZA Integrative Orthologyethylene biosynthetic processAT2G35635
GO:0009793 IEAPLAZA Integrative Orthologyembryo development ending in seed dormancyAT1G31340

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAInterProprotein binding
GO:0003735 IEAPLAZA Integrative Orthologystructural constituent of ribosomeAT2G35635
GO:0003729 IEAPLAZA Integrative OrthologymRNA bindingAT2G35635

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005618 IEAPLAZA Integrative Orthologycell wallAT3G09790
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT2G35635
GO:0005622 IEAPLAZA Integrative OrthologyintracellularAT2G35635
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT2G35635
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT2G35635
GO:0005774 IEAPLAZA Integrative Orthologyvacuolar membraneAT5G37640
GO:0005773 IEAPLAZA Integrative OrthologyvacuoleAT2G35635
GO:0005730 IEAPLAZA Integrative OrthologynucleolusAT2G35635
GO:0022625 IEAPLAZA Integrative Orthologycytosolic large ribosomal subunitAT2G35635
GO:0005794 IEAPLAZA Integrative OrthologyGolgi apparatusAT2G35635
GO:0022627 IEAPLAZA Integrative Orthologycytosolic small ribosomal subunitAT2G35635

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000626Ubiquitin domain
IPR019956Ubiquitin
IPR019954Ubiquitin conserved site
IPR029071Ubiquitin-related domain

Mapman id Description
19.2.2.1.1.Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-fold protein (UBQ)
No SignalP domains detected for this gene.