Gene: Pp3s34_420 (Physcomitrella patens)

Overview top

Gene Identifier
Pp3s34_420
Transcript Identifier
Pp3s34_420V3.1
Gene Type
Coding gene
Location
scaffold_34 : 101782-132454 : negative

Family

Gene family
HOM04M000175
(527 genes in 29 species)
specific family
Duplication type
Tandem duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
namePp3s34_420V3.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006810 IEAInterProtransport
GO:0042450 IEAInterProarginine biosynthetic process via ornithine
GO:0006044 IEAInterProN-acetylglucosamine metabolic process
GO:0008152 IEAInterPrometabolic process
GO:0055114 IEAInterProoxidation-reduction process
GO:0005975 IEAInterProcarbohydrate metabolic process
GO:1901135 IEAInterProcarbohydrate derivative metabolic process
GO:0006355 IEAInterProregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004056 IEAInterProargininosuccinate lyase activity
GO:0004342 IEAInterProglucosamine-6-phosphate deaminase activity
GO:0016491 IEAInterProoxidoreductase activity
GO:0003824 IEAInterProcatalytic activity
GO:0097367 IEAInterProcarbohydrate derivative binding
GO:0003700 IEAInterProtranscription factor activity, sequence-specific DNA binding
GO:0008080 IEAInterProN-acetyltransferase activity
GO:0016829 IEAInterProlyase activity
GO:0005524 IEAInterProATP binding
GO:0016887 IEAInterProATPase activity
GO:0030246 IEAInterProcarbohydrate binding
GO:0003677 IEAInterProDNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020 IEAInterPromembrane

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000515ABC transporter type 1, transmembrane domain MetI-like
IPR009049Argininosuccinate lyase
IPR004547Glucosamine-6-phosphate isomerase
IPR024078Putative deacetylase LmbE-like domain
IPR029068Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
IPR016162Aldehyde dehydrogenase N-terminal domain
IPR024083Fumarase/histidase, N-terminal
IPR013785Aldolase-type TIM barrel
IPR029062Class I glutamine amidotransferase-like
IPR011991Winged helix-turn-helix DNA-binding domain
IPR013783Immunoglobulin-like fold
IPR023753FAD/NAD(P)-binding domain
IPR008794Proline racemase family
IPR029419Argininosuccinate lyase, C-terminal
IPR006148Glucosamine/galactosamine-6-phosphate isomerase
IPR006076FAD dependent oxidoreductase
IPR001347Sugar isomerase (SIS)
IPR000600ROK family
IPR022761Fumarate lyase, N-terminal
IPR002731ATPase, BadF/BadG/BcrA/BcrD type
IPR000281Helix-turn-helix protein RpiR
IPR018905Alpha-galactosidase, NEW3 domain
IPR010343Aromatic acid exporter family member 1
IPR003737N-acetylglucosaminyl phosphatidylinositol deacetylase-related
IPR000182GNAT domain
IPR010644Putative heme-dependent peroxidase/Chlorite dismutase
IPR002220DapA-like
IPR003439ABC transporter-like
IPR015590Aldehyde dehydrogenase domain
IPR021062Putative aromatic acid exporter, C-terminal
IPR004360Glyoxalase/fosfomycin resistance/dioxygenase domain
IPR000362Fumarate lyase family
IPR018321Glucosamine-6-phosphate isomerase, conserved site
IPR017871ABC transporter, conserved site
IPR016160Aldehyde dehydrogenase, cysteine active site
IPR003593AAA+ ATPase domain
IPR013784Carbohydrate-binding-like fold
IPR016181Acyl-CoA N-acyltransferase
IPR008969Carboxypeptidase-like, regulatory domain
IPR011008Dimeric alpha-beta barrel
IPR008995Molybdate/tungstate binding, C-terminal
IPR008948L-Aspartase-like
IPR016161Aldehyde/histidinol dehydrogenase
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR009057Homeobox domain-like

Mapman id Description
3.13.9.2.1.Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-N-acetylglucosamine biosynthesis.salvage biosynthesis.N-acetylglucosamine kinase
4.1.2.2.3.1.Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.lysine.hydroxy-tetrahydrodihydrodipicolinate synthase
No SignalP domains detected for this gene.