Gene: Pp3c6_9970 (Physcomitrella patens)

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Gene Identifier
Pp3c6_9970
Transcript Identifier
Pp3c6_9970V3.2
Gene Type
Coding gene
Location
Chr06 : 6271124-6272807 : positive

Family

Gene family
HOM04M000010
(3187 genes in 28 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasPp1s317_55V6
aliasPhpat.006G036800
namePp3c6_9970V3.2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0080091 IEAPLAZA Integrative Orthologyregulation of raffinose metabolic processAT4G28110
GO:0080090 IEAPLAZA Integrative Orthologyregulation of primary metabolic processAT4G28110
GO:0010200 IEAPLAZA Integrative Orthologyresponse to chitinAT1G74650
GO:0050826 IEAPLAZA Integrative Orthologyresponse to freezingAT2G31180
GO:0048354 IEAPLAZA Integrative Orthologymucilage biosynthetic process involved in seed coat developmentAT3G13540
GO:0009819 IEAPLAZA Integrative Orthologydrought recoveryAT5G07690
GO:0009737 IEAPLAZA Integrative Orthologyresponse to abscisic acidAT5G16770
GO:0009617 IEAPLAZA Integrative Orthologyresponse to bacteriumAT5G07690
GO:0051555 IEAPLAZA Integrative Orthologyflavonol biosynthetic processAT3G62610
GO:0009739 IEAPLAZA Integrative Orthologyresponse to gibberellinAT1G74650
GO:0009866 IEAPLAZA Integrative Orthologyinduced systemic resistance, ethylene mediated signaling pathwayAT1G56160
GO:0009625 IEAPLAZA Integrative Orthologyresponse to insectAT5G07690
GO:0009867 IEAPLAZA Integrative Orthologyjasmonic acid mediated signaling pathwayAT1G22640
GO:0009626 IEAPLAZA Integrative Orthologyplant-type hypersensitive responseAT3G28910
GO:0009740 IEAPLAZA Integrative Orthologygibberellic acid mediated signaling pathwayAT1G22640
GO:0010090 IEAPLAZA Integrative Orthologytrichome morphogenesisAT3G13540
GO:0010091 IEAPLAZA Integrative Orthologytrichome branchingAT3G01140
GO:0042761 IEAPLAZA Integrative Orthologyvery long-chain fatty acid biosynthetic processAT3G28910
GO:0009620 IEAPLAZA Integrative Orthologyresponse to fungusAT3G06490
GO:0046686 IEAPLAZA Integrative Orthologyresponse to cadmium ionAT3G23250
GO:0006355 IEAPLAZA Integrative Orthologyregulation of transcription, DNA-templatedAT5G62470
GO:0080167 IEAPLAZA Integrative Orthologyresponse to karrikinAT3G47600
GO:1901332 IEAPLAZA Integrative Orthologynegative regulation of lateral root developmentAT1G34670
GO:0080086 IEAPLAZA Integrative Orthologystamen filament developmentAT1G22640
GO:2000070 IEAPLAZA Integrative Orthologyregulation of response to water deprivationAT5G07690
GO:1905255 IEAPLAZA Integrative Orthologyregulation of RNA binding transcription factor activityAT5G07690
GO:0031930 IEAPLAZA Integrative Orthologymitochondria-nucleus signaling pathwayAT5G07690
GO:2000652 IEAPLAZA Integrative Orthologyregulation of secondary cell wall biogenesisAT1G79180
GO:0010118 IEAPLAZA Integrative Orthologystomatal movementAT1G08810
GO:0010438 IEAPLAZA Integrative Orthologycellular response to sulfur starvationAT5G60890
GO:0009809 IEAPLAZA Integrative Orthologylignin biosynthetic processAT1G79180
GO:0010439 IEAPLAZA Integrative Orthologyregulation of glucosinolate biosynthetic processAT5G07690
GO:0000162 IEAPLAZA Integrative Orthologytryptophan biosynthetic processAT5G60890
GO:0009409 IEAPLAZA Integrative Orthologyresponse to coldAT2G31180
GO:0009733 IEAPLAZA Integrative Orthologyresponse to auxinAT2G47460
GO:0002213 IEAPLAZA Integrative Orthologydefense response to insectAT5G60890
GO:0009414 IEAPLAZA Integrative Orthologyresponse to water deprivationAT5G62470
GO:0009416 IEAPLAZA Integrative Orthologyresponse to light stimulusAT3G62610
GO:0071281 IEAPLAZA Integrative Orthologycellular response to iron ionAT1G56160
GO:0009813 IEAPLAZA Integrative Orthologyflavonoid biosynthetic processAT2G47460
GO:0009411 IEAPLAZA Integrative Orthologyresponse to UVAT1G79180
GO:0009611 IEAPLAZA Integrative Orthologyresponse to woundingAT1G22640
GO:0008285 IEAPLAZA Integrative Orthologynegative regulation of cell proliferationAT3G62610
GO:0009892 IEAPLAZA Integrative Orthologynegative regulation of metabolic processAT1G22640
GO:0010025 IEAPLAZA Integrative Orthologywax biosynthetic processAT5G62470
GO:0009651 IEAPLAZA Integrative Orthologyresponse to salt stressAT5G62470
GO:0016049 IEAPLAZA Integrative Orthologycell growthAT4G28110
GO:0010224 IEAPLAZA Integrative Orthologyresponse to UV-BAT3G62610
GO:0071369 IEAPLAZA Integrative Orthologycellular response to ethylene stimulusAT1G56160
GO:0010105 IEAPLAZA Integrative Orthologynegative regulation of ethylene-activated signaling pathwayAT5G07690
GO:0010468 IEAPLAZA Integrative Orthologyregulation of gene expressionAT3G13540
GO:0071365 IEAPLAZA Integrative Orthologycellular response to auxin stimulusAT1G34670
GO:0009759 IEAPLAZA Integrative Orthologyindole glucosinolate biosynthetic processAT5G60890
GO:0009800 IEAPLAZA Integrative Orthologycinnamic acid biosynthetic processAT1G22640
GO:0009723 IEAPLAZA Integrative Orthologyresponse to ethyleneAT2G47460
GO:0006970 IEAPLAZA Integrative Orthologyresponse to osmotic stressAT4G21440
GO:0009644 IEAPLAZA Integrative Orthologyresponse to high light intensityAT5G07690
GO:0009682 IEAPLAZA Integrative Orthologyinduced systemic resistanceAT5G07690
GO:0000902 IEAPLAZA Integrative Orthologycell morphogenesisAT5G15310
GO:1900386 IEAPLAZA Integrative Orthologypositive regulation of flavonol biosynthetic processAT3G62610
GO:0050832 IEAPLAZA Integrative Orthologydefense response to fungusAT5G07690
GO:0010214 IEAPLAZA Integrative Orthologyseed coat developmentAT3G13540
GO:0071732 IEAPLAZA Integrative Orthologycellular response to nitric oxideAT1G56160
GO:0048640 IEAPLAZA Integrative Orthologynegative regulation of developmental growthAT3G62610
GO:0048443 IEAPLAZA Integrative Orthologystamen developmentAT1G22640
GO:0045893 IEAPLAZA Integrative Orthologypositive regulation of transcription, DNA-templatedAT2G47460
GO:0045892 IEAPLAZA Integrative Orthologynegative regulation of transcription, DNA-templatedAT4G28110
GO:0009909 IEAPLAZA Integrative Orthologyregulation of flower developmentAT3G61250
GO:0001666 IEAPLAZA Integrative Orthologyresponse to hypoxiaAT3G28910
GO:0009755 IEAPLAZA Integrative Orthologyhormone-mediated signaling pathwayAT5G07690
GO:0042335 IEAPLAZA Integrative Orthologycuticle developmentAT4G28110
GO:0009751 IEAPLAZA Integrative Orthologyresponse to salicylic acidAT1G74650
GO:0009753 IEAPLAZA Integrative Orthologyresponse to jasmonic acidAT3G61250

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0016301 IEAPLAZA Integrative Orthologykinase activityAT5G60890
GO:0003700 IEAPLAZA Integrative Orthologytranscription factor activity, sequence-specific DNA bindingAT2G31180
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT1G22640
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT3G28910

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT1G18710
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT5G62470
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT1G74080

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001005SANT/Myb domain
IPR017930Myb domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.2.1.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)
No SignalP domains detected for this gene.