Gene: Pp3c2_31590 (Physcomitrella patens)

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Gene Identifier
Pp3c2_31590
Transcript Identifier
Pp3c2_31590V3.2
Gene Type
Coding gene
Location
Chr02 : 20973492-20977138 : negative

Family

Gene family
HOM04M002643
(61 genes in 28 species)
specific family
Duplication type
Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasPhpat.002G130500
aliasPp1s371_26V6
aliasPhypa_98900
namePp3c2_31590V3.2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006511 IEAPLAZA Integrative Orthologyubiquitin-dependent protein catabolic processAT1G77000
GO:0010311 IEAPLAZA Integrative Orthologylateral root formationAT1G21410
GO:0016567 IEAPLAZA Integrative Orthologyprotein ubiquitinationAT1G21410
GO:0051603 IEAPLAZA Integrative Orthologyproteolysis involved in cellular protein catabolic processAT1G77000
GO:0031146 IEAPLAZA Integrative OrthologySCF-dependent proteasomal ubiquitin-dependent protein catabolic processAT1G21410
GO:0071365 IEAPLAZA Integrative Orthologycellular response to auxin stimulusAT1G21410
GO:1901332 IEAPLAZA Integrative Orthologynegative regulation of lateral root developmentAT1G77000
GO:0051781 IEAPLAZA Integrative Orthologypositive regulation of cell divisionAT1G21410
GO:0010286 IEAPLAZA Integrative Orthologyheat acclimationAT1G77000

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAInterProprotein binding
GO:0004842 IEAPLAZA Integrative Orthologyubiquitin-protein transferase activityAT1G21410

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0019005 IEAPLAZA Integrative OrthologySCF ubiquitin ligase complexAT1G21410
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G21410

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR032675Leucine-rich repeat domain, L domain-like
IPR001611Leucine-rich repeat
IPR001810F-box domain
IPR006553Leucine-rich repeat, cysteine-containing subtype

Mapman id Description
19.2.2.8.1.4.1.Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.component SKP2
No SignalP domains detected for this gene.