Gene: Pp3c22_2500 (Physcomitrella patens)

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Gene Identifier
Pp3c22_2500
Transcript Identifier
Pp3c22_2500V3.1
Gene Type
Coding gene
Location
Chr22 : 1631421-1636880 : positive

Family

Gene family
HOM04M000225
(426 genes in 29 species)
specific family
Subfamily
ORTHO04M000788
(143 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasPp1s162_12V6
aliasPhpat.022G009600
aliasPhypa_87812
namePp3c22_2500V3.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009920 IEAPLAZA Integrative Orthologycell plate formation involved in plant-type cell wall biogenesisAT5G42080
GO:0000266 IEAPLAZA Integrative Orthologymitochondrial fissionAT1G14830
GO:0007005 IEAPLAZA Integrative Orthologymitochondrion organizationAT1G14830
GO:0048766 IEAPLAZA Integrative Orthologyroot hair initiationAT5G42080
GO:0010091 IEAPLAZA Integrative Orthologytrichome branchingAT5G42080
GO:0010051 IEAPLAZA Integrative Orthologyxylem and phloem pattern formationAT5G42080
GO:0046686 IEAPLAZA Integrative Orthologyresponse to cadmium ionAT3G60190
GO:0010152 IEAPLAZA Integrative Orthologypollen maturationAT1G14830
GO:2000114 IEAPLAZA Integrative Orthologyregulation of establishment of cell polarityAT5G42080
GO:0050832 IEAPLAZA Integrative Orthologydefense response to fungusAT3G60190
GO:0072583 IEAPLAZA Integrative Orthologyclathrin-dependent endocytosisAT5G42080
GO:0009793 IEAPLAZA Integrative Orthologyembryo development ending in seed dormancyAT5G42080
GO:0000911 IEAPLAZA Integrative Orthologycytokinesis by cell plate formationAT5G42080

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005525 IEAInterProGTP binding
GO:0003924 IEAInterProGTPase activity
GO:0030276 IEAPLAZA Integrative Orthologyclathrin bindingAT5G42080
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G42080
GO:0043424 IEAPLAZA Integrative Orthologyprotein histidine kinase bindingAT5G42080

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT3G60190
GO:0016020 IEAPLAZA Integrative OrthologymembraneAT1G14830
GO:0005938 IEAPLAZA Integrative Orthologycell cortexAT1G14830
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT1G14830
GO:0009504 IEAPLAZA Integrative Orthologycell plateAT1G14830
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT3G60190
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT3G60190
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT5G42080
GO:0009535 IEAPLAZA Integrative Orthologychloroplast thylakoid membraneAT5G42080
GO:0005773 IEAPLAZA Integrative OrthologyvacuoleAT3G60190
GO:0005874 IEAPLAZA Integrative OrthologymicrotubuleAT5G42080
GO:0005774 IEAPLAZA Integrative Orthologyvacuolar membraneAT3G60190

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR022812Dynamin superfamily
IPR000375Dynamin central domain
IPR003130Dynamin GTPase effector
IPR019762Dynamin, GTPase region, conserved site
IPR030381Dynamin-type guanine nucleotide-binding (G) domain
IPR020850GTPase effector domain
IPR001401Dynamin, GTPase domain
IPR027417P-loop containing nucleoside triphosphate hydrolase

Mapman id Description
22.1.7.1.Vesicle trafficking.clathrin coated vesicle (CCV) machinery.CCV plasma membrane detachment.dynamin (DRP1)
No SignalP domains detected for this gene.