Gene: Pp3c22_10880 (Physcomitrella patens)

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Gene Identifier
Pp3c22_10880
Transcript Identifier
Pp3c22_10880V3.1
Gene Type
Coding gene
Location
Chr22 : 6912560-6914533 : negative

Family

Gene family
HOM04M000008
(3579 genes in 29 species)
specific family
Subfamily
ORTHO04M000003
(3095 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasPhpat.022G041400
aliasPhypa_39624
aliasPp1s121_50V6
namePp3c22_10880V3.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEAInterProregulation of transcription, DNA-templated
GO:0010102 IEAPLAZA Integrative Orthologylateral root morphogenesisAT5G18560
GO:1905392 IEAPLAZA Integrative Orthologyplant organ morphogenesisAT1G12980
GO:0010468 IEAPLAZA Integrative Orthologyregulation of gene expressionAT1G12980
GO:0090708 IEAPLAZA Integrative Orthologyspecification of plant organ axis polarityAT1G12980
GO:0009739 IEAPLAZA Integrative Orthologyresponse to gibberellinAT5G13910
GO:0048825 IEAPLAZA Integrative Orthologycotyledon developmentAT1G24590
GO:0009867 IEAPLAZA Integrative Orthologyjasmonic acid mediated signaling pathwayAT1G12980
GO:0006970 IEAPLAZA Integrative Orthologyresponse to osmotic stressAT1G12980
GO:0009880 IEAPLAZA Integrative Orthologyembryonic pattern specificationAT1G24590
GO:0031053 IEAPLAZA Integrative Orthologyprimary miRNA processingAT1G12980
GO:0010451 IEAPLAZA Integrative Orthologyfloral meristem growthAT5G18560
GO:0010030 IEAPLAZA Integrative Orthologypositive regulation of seed germinationAT5G13910
GO:0010432 IEAPLAZA Integrative Orthologybract developmentAT5G18560
GO:0051726 IEAPLAZA Integrative Orthologyregulation of cell cycleAT1G24590
GO:0048366 IEAPLAZA Integrative Orthologyleaf developmentAT3G61630
GO:0009908 IEAPLAZA Integrative Orthologyflower developmentAT5G18560
GO:0009733 IEAPLAZA Integrative Orthologyresponse to auxinAT1G24590
GO:0009735 IEAPLAZA Integrative Orthologyresponse to cytokininAT1G12980
GO:0009873 IEAPLAZA Integrative Orthologyethylene-activated signaling pathwayAT1G28160
GO:0042991 IEAPLAZA Integrative Orthologytranscription factor import into nucleusAT3G61630
GO:0009793 IEAPLAZA Integrative Orthologyembryo development ending in seed dormancyAT3G61630
GO:1900150 IEAPLAZA Integrative Orthologyregulation of defense response to fungusAT1G12980
GO:0010582 IEAPLAZA Integrative Orthologyfloral meristem determinacyAT5G18560
GO:0010286 IEAPLAZA Integrative Orthologyheat acclimationAT1G12980

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700 IEAInterProtranscription factor activity, sequence-specific DNA binding
GO:0003677 IEAInterProDNA binding
GO:0070878 IEAPLAZA Integrative Orthologyprimary miRNA bindingAT1G12980
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT1G24590
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT3G61630
GO:0044212 IEAPLAZA Integrative Orthologytranscription regulatory region DNA bindingAT5G18560

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0010445 IEAPLAZA Integrative Orthologynuclear dicing bodyAT1G12980
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT3G61630
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT3G61630
GO:0005622 IEAPLAZA Integrative OrthologyintracellularAT1G28160
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT1G12980

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001471AP2/ERF domain
IPR016177DNA-binding domain

Mapman id Description
15.5.7.1.RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (ERF)
No SignalP domains detected for this gene.