Gene: Pp3c21_12340 (Physcomitrella patens)

Overview top

Gene Identifier
Pp3c21_12340
Transcript Identifier
Pp3c21_12340V3.2
Gene Type
Coding gene
Location
Chr21 : 7897537-7900006 : positive

Family

Gene family
HOM04M000067
(1195 genes in 29 species)
specific family
Subfamily
ORTHO04M000038
(892 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasPhpat.021G045100
aliasPp1s369_30V6
aliasPhypa_63513
namePp3c21_12340V3.2

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006508 IEAInterProproteolysis
GO:0010224 IEAPLAZA Integrative Orthologyresponse to UV-BAT5G45890
GO:0090548 IEAPLAZA Integrative Orthologyresponse to nitrate starvationAT3G48340
GO:0010623 IEAPLAZA Integrative Orthologyprogrammed cell death involved in cell developmentAT5G45890
GO:0009739 IEAPLAZA Integrative Orthologyresponse to gibberellinAT4G36880
GO:0009817 IEAPLAZA Integrative Orthologydefense response to fungus, incompatible interactionAT5G45890
GO:0009744 IEAPLAZA Integrative Orthologyresponse to sucroseAT5G45890
GO:0060359 IEAPLAZA Integrative Orthologyresponse to ammonium ionAT3G48340
GO:0006995 IEAPLAZA Integrative Orthologycellular response to nitrogen starvationAT3G48340
GO:0009723 IEAPLAZA Integrative Orthologyresponse to ethyleneAT5G45890
GO:0009845 IEAPLAZA Integrative Orthologyseed germinationAT4G36880
GO:0009626 IEAPLAZA Integrative Orthologyplant-type hypersensitive responseAT5G45890
GO:0007568 IEAPLAZA Integrative OrthologyagingAT5G45890
GO:0006970 IEAPLAZA Integrative Orthologyresponse to osmotic stressAT3G48340
GO:0080187 IEAPLAZA Integrative Orthologyfloral organ senescenceAT5G45890
GO:1902025 IEAPLAZA Integrative Orthologynitrate importAT3G48340
GO:0010150 IEAPLAZA Integrative Orthologyleaf senescenceAT5G45890
GO:1901371 IEAPLAZA Integrative Orthologyregulation of leaf morphogenesisAT3G48340
GO:0010114 IEAPLAZA Integrative Orthologyresponse to red lightAT4G36880
GO:0050832 IEAPLAZA Integrative Orthologydefense response to fungusAT1G47128
GO:1990169 IEAPLAZA Integrative Orthologystress response to copper ionAT5G45890
GO:0009749 IEAPLAZA Integrative Orthologyresponse to glucoseAT5G45890
GO:0009733 IEAPLAZA Integrative Orthologyresponse to auxinAT5G45890
GO:0009414 IEAPLAZA Integrative Orthologyresponse to water deprivationAT1G47128
GO:0009735 IEAPLAZA Integrative Orthologyresponse to cytokininAT5G45890
GO:0048831 IEAPLAZA Integrative Orthologyregulation of shoot system developmentAT3G48340
GO:0009750 IEAPLAZA Integrative Orthologyresponse to fructoseAT5G45890
GO:0042538 IEAPLAZA Integrative Orthologyhyperosmotic salinity responseAT4G36880
GO:2000280 IEAPLAZA Integrative Orthologyregulation of root developmentAT3G48340

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008234 IEAInterProcysteine-type peptidase activity
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT1G47128
GO:0008233 IEAPLAZA Integrative Orthologypeptidase activityAT1G47128
GO:0005509 IEAPLAZA Integrative Orthologycalcium ion bindingAT4G36880

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005618 IEAPLAZA Integrative Orthologycell wallAT4G36880
GO:0005777 IEAPLAZA Integrative OrthologyperoxisomeAT4G36880
GO:0005783 IEAPLAZA Integrative Orthologyendoplasmic reticulumAT1G09850
GO:0010494 IEAPLAZA Integrative Orthologycytoplasmic stress granuleAT1G47128
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT3G19400
GO:0048046 IEAPLAZA Integrative OrthologyapoplastAT1G47128
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT1G47128
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT1G47128
GO:0005773 IEAPLAZA Integrative OrthologyvacuoleAT1G47128
GO:0000932 IEAPLAZA Integrative OrthologyP-bodyAT1G47128
GO:0010282 IEAPLAZA Integrative Orthologysenescence-associated vacuoleAT5G45890

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR013128Peptidase C1A
IPR000668Peptidase C1A, papain C-terminal
IPR000118Granulin
IPR013201Cathepsin propeptide inhibitor domain (I29)
IPR025661Cysteine peptidase, asparagine active site
IPR000169Cysteine peptidase, cysteine active site
IPR025660Cysteine peptidase, histidine active site

Mapman id Description
50.3.4.Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase acting on peptide bond (peptidase)
No SignalP domains detected for this gene.