Gene: Pp3c20_7140 (Physcomitrella patens)

Overview top

Gene Identifier
Pp3c20_7140
Transcript Identifier
Pp3c20_7140V3.2
Gene Type
Coding gene
Location
Chr20 : 4364423-4369540 : positive

Family

Gene family
HOM04M003689
(47 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasPhpat.020G030400
aliasPhypa_104572
aliasPp1s9_243V6
namePp3c20_7140V3.2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006106 IEAInterProfumarate metabolic process
GO:0006099 IEAInterProtricarboxylic acid cycle
GO:0042128 IEAPLAZA Integrative Orthologynitrate assimilationAT5G50950
GO:0048868 IEAPLAZA Integrative Orthologypollen tube developmentAT2G47510
GO:0009631 IEAPLAZA Integrative Orthologycold acclimationAT5G50950
GO:0010109 IEAPLAZA Integrative Orthologyregulation of photosynthesisAT5G50950
GO:0009651 IEAPLAZA Integrative Orthologyresponse to salt stressAT2G47510
GO:0006979 IEAPLAZA Integrative Orthologyresponse to oxidative stressAT2G47510

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004333 IEAInterProfumarate hydratase activity
GO:0016829 IEAInterProlyase activity
GO:0003824 IEAInterProcatalytic activity
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT2G47510

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0045239 IEAInterProtricarboxylic acid cycle enzyme complex
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT5G50950
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT2G47510

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR024083Fumarase/histidase, N-terminal
IPR005677Fumarate hydratase, class II
IPR018951Fumarase C, C-terminal
IPR022761Fumarate lyase, N-terminal
IPR000362Fumarate lyase family
IPR020557Fumarate lyase, conserved site
IPR008948L-Aspartase-like

Mapman id Description
2.3.7.Cellular respiration.tricarboxylic acid cycle.fumarase
No SignalP domains detected for this gene.