Gene: Pp3c20_7050 (Physcomitrella patens)

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Gene Identifier
Pp3c20_7050
Transcript Identifier
Pp3c20_7050V3.1
Gene Type
Coding gene
Location
Chr20 : 4310505-4312627 : negative

Family

Gene family
HOM04M000064
(1220 genes in 29 species)
specific family
Subfamily
ORTHO04M000029
(1010 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasPhypa_159080
aliasPhpat.020G029700
aliasPp1s9_234V6
namePp3c20_7050V3.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010158 IEAPLAZA Integrative Orthologyabaxial cell fate specificationAT5G16560
GO:1905392 IEAPLAZA Integrative Orthologyplant organ morphogenesisAT5G16560
GO:0048481 IEAPLAZA Integrative Orthologyplant ovule developmentAT1G32240
GO:0048440 IEAPLAZA Integrative Orthologycarpel developmentAT1G32240
GO:0009943 IEAPLAZA Integrative Orthologyadaxial/abaxial axis specificationAT5G16560
GO:0009944 IEAPLAZA Integrative Orthologypolarity specification of adaxial/abaxial axisAT1G32240
GO:0009956 IEAPLAZA Integrative Orthologyradial pattern formationAT5G16560
GO:0006355 IEAPLAZA Integrative Orthologyregulation of transcription, DNA-templatedAT4G17695
GO:0010051 IEAPLAZA Integrative Orthologyxylem and phloem pattern formationAT5G16560
GO:0080060 IEAPLAZA Integrative Orthologyintegument developmentAT5G42630

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G16560
GO:0044212 IEAPLAZA Integrative Orthologytranscription regulatory region DNA bindingAT5G42630

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005618 IEAPLAZA Integrative Orthologycell wallAT5G42630
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT5G16560

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001005SANT/Myb domain
IPR009057Homeobox domain-like
IPR006447Myb domain, plants

Mapman id Description
15.5.2.3.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (GARP)
No SignalP domains detected for this gene.