Gene: Pp3c20_11600 (Physcomitrella patens)

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Gene Identifier
Pp3c20_11600
Transcript Identifier
Pp3c20_11600V3.1
Gene Type
Coding gene
Location
Chr20 : 7425511-7427169 : positive

Family

Gene family
HOM04M000012
(2892 genes in 29 species)
specific family
Duplication type
Tandem duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasPhpat.020G046700
aliasPhypa_140362
aliasPp1s166_91V6
namePp3c20_11600V3.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016567 IEAPLAZA Integrative Orthologyprotein ubiquitinationAT5G42200
GO:0010200 IEAPLAZA Integrative Orthologyresponse to chitinAT4G11360
GO:0046686 IEAPLAZA Integrative Orthologyresponse to cadmium ionAT4G11360
GO:0080167 IEAPLAZA Integrative Orthologyresponse to karrikinAT4G30400
GO:0009793 IEAPLAZA Integrative Orthologyembryo development ending in seed dormancyAT2G18650
GO:0048577 IEAPLAZA Integrative Orthologynegative regulation of short-day photoperiodism, floweringAT3G19140

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004842 IEAPLAZA Integrative Orthologyubiquitin-protein transferase activityAT5G42200

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT3G19140

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type

Mapman id Description
19.2.2.1.5.3.3.Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class E3 ligase
No SignalP domains detected for this gene.