Gene: Pp3c17_19780 (Physcomitrella patens)

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Gene Identifier
Pp3c17_19780
Transcript Identifier
Pp3c17_19780V3.2
Gene Type
Coding gene
Location
Chr17 : 13252101-13255685 : positive

Family

Gene family
HOM04M000010
(3187 genes in 28 species)
specific family
Duplication type
Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
namePp3c17_19780V3.2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:2000067 IEAPLAZA Integrative Orthologyregulation of root morphogenesisAT5G57620
GO:0035987 IEAPLAZA Integrative Orthologyendodermal cell differentiationAT5G57620
GO:0030154 IEAPLAZA Integrative Orthologycell differentiationAT5G57620
GO:0009737 IEAPLAZA Integrative Orthologyresponse to abscisic acidAT2G36890
GO:0052545 IEAPLAZA Integrative Orthologycallose localizationAT3G28470
GO:0009739 IEAPLAZA Integrative Orthologyresponse to gibberellinAT5G65790
GO:0010090 IEAPLAZA Integrative Orthologytrichome morphogenesisAT5G56110
GO:0045597 IEAPLAZA Integrative Orthologypositive regulation of cell differentiationAT5G57620
GO:0009785 IEAPLAZA Integrative Orthologyblue light signaling pathwayAT2G36890
GO:0006355 IEAPLAZA Integrative Orthologyregulation of transcription, DNA-templatedAT5G56110
GO:0055046 IEAPLAZA Integrative OrthologymicrogametogenesisAT3G28470
GO:0045893 IEAPLAZA Integrative Orthologypositive regulation of transcription, DNA-templatedAT5G57620
GO:0045892 IEAPLAZA Integrative Orthologynegative regulation of transcription, DNA-templatedAT5G57620
GO:0009751 IEAPLAZA Integrative Orthologyresponse to salicylic acidAT5G65790
GO:0009555 IEAPLAZA Integrative Orthologypollen developmentAT5G56110
GO:0009753 IEAPLAZA Integrative Orthologyresponse to jasmonic acidAT2G36890
GO:0048658 IEAPLAZA Integrative Orthologyanther wall tapetum developmentAT5G56110
GO:0008285 IEAPLAZA Integrative Orthologynegative regulation of cell proliferationAT5G57620
GO:2000021 IEAPLAZA Integrative Orthologyregulation of ion homeostasisAT5G57620

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT2G36890
GO:0003682 IEAPLAZA Integrative Orthologychromatin bindingAT5G56110
GO:0003700 IEAPLAZA Integrative Orthologytranscription factor activity, sequence-specific DNA bindingAT5G57620
GO:0000975 IEAPLAZA Integrative Orthologyregulatory region DNA bindingAT5G57620
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT5G56110

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT5G56110
GO:0048226 IEAPLAZA Integrative OrthologyCasparian stripAT5G57620

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001005SANT/Myb domain
IPR017930Myb domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.2.1.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)
21.8.1.1.Cell wall organisation.sporopollenin.biosynthesis.transcriptional key regulator (MS188)
No SignalP domains detected for this gene.