Gene: Pp3c16_8560 (Physcomitrella patens)

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Gene Identifier
Pp3c16_8560
Transcript Identifier
Pp3c16_8560V3.1
Gene Type
Coding gene
Location
Chr16 : 5269725-5274315 : positive

Family

Gene family
HOM04M004088
(44 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasPhpat.016G034200
aliasPhypa_173015
aliasPp1s402_49V6
namePp3c16_8560V3.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0050832 IEAPLAZA Integrative Orthologydefense response to fungusAT4G15900
GO:0010204 IEAPLAZA Integrative Orthologydefense response signaling pathway, resistance gene-independentAT4G15900
GO:0006508 IEAPLAZA Integrative OrthologyproteolysisAT4G15900
GO:0048366 IEAPLAZA Integrative Orthologyleaf developmentAT4G15900
GO:0045892 IEAPLAZA Integrative Orthologynegative regulation of transcription, DNA-templatedAT4G15900
GO:0009749 IEAPLAZA Integrative Orthologyresponse to glucoseAT4G15900
GO:0048364 IEAPLAZA Integrative Orthologyroot developmentAT4G15900
GO:0009755 IEAPLAZA Integrative Orthologyhormone-mediated signaling pathwayAT4G15900
GO:0048825 IEAPLAZA Integrative Orthologycotyledon developmentAT4G15900
GO:0042742 IEAPLAZA Integrative Orthologydefense response to bacteriumAT4G15900
GO:0010182 IEAPLAZA Integrative Orthologysugar mediated signaling pathwayAT4G15900
GO:0009870 IEAPLAZA Integrative Orthologydefense response signaling pathway, resistance gene-dependentAT4G15900
GO:0010154 IEAPLAZA Integrative Orthologyfruit developmentAT4G15900

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAInterProprotein binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT4G15900
GO:0080008 IEAPLAZA Integrative OrthologyCul4-RING E3 ubiquitin ligase complexAT4G15900

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR015943WD40/YVTN repeat-like-containing domain
IPR001680WD40 repeat
IPR020472G-protein beta WD-40 repeat
IPR019775WD40 repeat, conserved site
IPR017986WD40-repeat-containing domain

Mapman id Description
16.4.5.1.3.RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).core components.component PRL1/MAC2
No SignalP domains detected for this gene.