Gene: Pp3c16_6100 (Physcomitrella patens)

Overview top

Gene Identifier
Pp3c16_6100
Transcript Identifier
Pp3c16_6100V3.3
Gene Type
Coding gene
Location
Chr16 : 3995602-3999904 : negative

Family

Gene family
HOM04M000105
(811 genes in 27 species)
specific family
Subfamily
ORTHO04M000303
(270 genes in 27 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasPhpat.016G023200
aliasPp1s341_4V6
aliasPhypa_198819
namePp3c16_6100V3.3

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEAInterProregulation of transcription, DNA-templated
GO:0009725 IEAInterProresponse to hormone
GO:0010158 IEAPLAZA Integrative Orthologyabaxial cell fate specificationAT2G33860
GO:0010047 IEAPLAZA Integrative Orthologyfruit dehiscenceAT5G62000
GO:0048481 IEAPLAZA Integrative Orthologyplant ovule developmentAT5G62000
GO:0045892 IEAPLAZA Integrative Orthologynegative regulation of transcription, DNA-templatedAT5G62000
GO:0010227 IEAPLAZA Integrative Orthologyfloral organ abscissionAT5G62000
GO:0009737 IEAPLAZA Integrative Orthologyresponse to abscisic acidAT5G62000
GO:0009409 IEAPLAZA Integrative Orthologyresponse to coldAT1G43950
GO:0009733 IEAPLAZA Integrative Orthologyresponse to auxinAT1G59750
GO:0009911 IEAPLAZA Integrative Orthologypositive regulation of flower developmentAT5G62000
GO:0009850 IEAPLAZA Integrative Orthologyauxin metabolic processAT2G33860
GO:0010050 IEAPLAZA Integrative Orthologyvegetative phase changeAT2G33860
GO:1903288 IEAPLAZA Integrative Orthologypositive regulation of potassium ion importAT5G62000
GO:0008285 IEAPLAZA Integrative Orthologynegative regulation of cell proliferationAT5G62000
GO:0010150 IEAPLAZA Integrative Orthologyleaf senescenceAT5G62000
GO:0010582 IEAPLAZA Integrative Orthologyfloral meristem determinacyAT2G33860

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0005515 IEAInterProprotein binding
GO:0016004 IEAPLAZA Integrative Orthologyphospholipase activator activityAT1G59750
GO:0003700 IEAPLAZA Integrative Orthologytranscription factor activity, sequence-specific DNA bindingAT5G62000
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT5G62000
GO:0044212 IEAPLAZA Integrative Orthologytranscription regulatory region DNA bindingAT1G35540
GO:0042802 IEAPLAZA Integrative Orthologyidentical protein bindingAT1G59750

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAInterPronucleus
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT2G46530
GO:0005794 IEAPLAZA Integrative OrthologyGolgi apparatusAT1G59750
GO:0009941 IEAPLAZA Integrative Orthologychloroplast envelopeAT1G43950

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR003340B3 DNA binding domain
IPR015300DNA-binding pseudobarrel domain
IPR010525Auxin response factor
IPR033389AUX/IAA domain
IPR000270PB1 domain

Mapman id Description
15.5.5.1.RNA biosynthesis.transcriptional regulation.B3 transcription factor superfamily.transcription factor (ARF)
No SignalP domains detected for this gene.