Gene: Potri.T106600 (Populus trichocarpa)

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Gene Identifier
Potri.T106600
Transcript Identifier
Potri.T106600.1
Gene Type
Coding gene
Location
scaffold_158 : 39514-43412 : negative

Family

Gene family
HOM04M001279
(113 genes in 28 species)
specific family
Subfamily
ORTHO04M001175
(109 genes in 28 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
similar to RNA-binding protein; putative; similar to Etr-1 (Danio rerio) GI:7670536; similar to BRUNO-like 6 RNA-binding protein (Homo sapiens) GI:15341327; similar to RNA-binding protein; putative; [ co-ortholog (1of2) of At1g03457, At4g03110, ]

Identifiers

Type Value
aliasPOPTR_0014s13070
aliasgw1.XIV.2763.1
idPotri.T106600.v3.1
pacid37255854
tidPotri.T106600.1.v3.1
tidPotri.T106600.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:2000028 IEAPLAZA Integrative Orthologyregulation of photoperiodism, floweringAT4G03110
GO:0006402 IEAPLAZA Integrative OrthologymRNA catabolic processAT4G03110
GO:0009626 IEAPLAZA Integrative Orthologyplant-type hypersensitive responseAT4G03110
GO:0080151 IEAPLAZA Integrative Orthologypositive regulation of salicylic acid mediated signaling pathwayAT4G03110
GO:0048573 IEAPLAZA Integrative Orthologyphotoperiodism, floweringAT1G03457

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676 IEAInterPronucleic acid binding
GO:0003723 IEAInterProRNA binding
GO:0003729 IEAPLAZA Integrative OrthologymRNA bindingAT4G03110

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT4G03110

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000504RNA recognition motif domain
IPR002343Paraneoplastic encephalomyelitis antigen

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.