Gene: Potri.T083800 (Populus trichocarpa)

Overview top

Gene Identifier
Potri.T083800
Transcript Identifier
Potri.T083800.1
Gene Type
Coding gene
Location
scaffold_94 : 103525-104016 : negative

Family

Gene family
HOM04M000501
(236 genes in 26 species)
specific family
Subfamily
ORTHO04M002148
(77 genes in 20 species)
specific family
Duplication type
Tandem duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
idPotri.T083800.v3.1
pacid37235119
tidPotri.T083800.1.v3.1
tidPotri.T083800.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0007275 IEAInterPromulticellular organism development
GO:0009908 IEAPLAZA Tree-based Orthologyflower developmentAT3G23130
GO:0010229 IEAPLAZA Tree-based Orthologyinflorescence developmentLOC_Os04g08600
GO:0045892 IEAPLAZA Tree-based Orthologynegative regulation of transcription, DNA-templatedAT3G23130
GO:0009409 IEAPLAZA Tree-based Orthologyresponse to coldAT5G06070
GO:0051973 IEAPLAZA Integrative Orthologypositive regulation of telomerase activityAT3G09290
GO:0048441 IEAPLAZA Tree-based Orthologypetal developmentAT5G06070
GO:0009755 IEAPLAZA Tree-based Orthologyhormone-mediated signaling pathwayAT3G23130
GO:0042127 IEAPLAZA Tree-based Orthologyregulation of cell proliferationAT3G23130
GO:0090691 IEAPLAZA Tree-based Orthologyformation of plant organ boundaryAT3G23130
GO:0006355 IEAPLAZA Integrative Orthologyregulation of transcription, DNA-templatedAT3G09290
GO:0008361 IEAPLAZA Tree-based Orthologyregulation of cell sizeAT3G23130
GO:0010093 IEAPLAZA Tree-based Orthologyspecification of floral organ identityAT3G23130

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676 IEAInterPronucleic acid binding
GO:0003700 IEAPLAZA Integrative Orthologytranscription factor activity, sequence-specific DNA bindingAT3G09290
GO:0003677 IEAPLAZA Tree-based OrthologyDNA bindingAT3G23130
GO:0008135 IEAPLAZA Tree-based Orthologytranslation factor activity, RNA bindingLOC_Os04g08600
GO:0008270 IEAPLAZA Tree-based Orthologyzinc ion bindingLOC_Os04g08600

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005739 IEAPLAZA Tree-based OrthologymitochondrionLOC_Os04g08600
GO:0005634 IEAPLAZA Tree-based OrthologynucleusLOC_Os04g08600
GO:0009536 IEAPLAZA Tree-based OrthologyplastidLOC_Os04g08600

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR031113Zinc finger protein JAGGED-like
IPR013087Zinc finger C2H2-type

Mapman id Description
15.5.15.RNA biosynthesis.transcriptional regulation.transcription factor (C2H2-ZF)
No SignalP domains detected for this gene.