Gene: Potri.T077600 (Populus trichocarpa)

Overview top

Gene Identifier
Potri.T077600
Transcript Identifier
Potri.T077600.4
Gene Type
Coding gene
Location
scaffold_85 : 119031-124428 : negative

Family

Gene family
HOM04M000050
(1385 genes in 23 species)
specific family
Duplication type
Tandem duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
idPotri.T077600.v3.1
pacid37232580
tidPotri.T077600.4.v3.1
tidPotri.T077600.4

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0007165 IEAInterProsignal transduction
GO:0009816 IEAPLAZA Integrative Orthologydefense response to bacterium, incompatible interactionAT5G45260
GO:0009817 IEAPLAZA Integrative Orthologydefense response to fungus, incompatible interactionAT3G44480
GO:0042742 IEAPLAZA Integrative Orthologydefense response to bacteriumAT5G45250
GO:0009626 IEAPLAZA Integrative Orthologyplant-type hypersensitive responseAT5G44870
GO:0006952 IEAPLAZA Integrative Orthologydefense responseAT4G16860
GO:0010193 IEAPLAZA Integrative Orthologyresponse to ozoneAT4G11170
GO:0071456 IEAPLAZA Integrative Orthologycellular response to hypoxiaAT4G19520
GO:0051607 IEAPLAZA Integrative Orthologydefense response to virusAT5G44870
GO:0002239 IEAPLAZA Integrative Orthologyresponse to oomycetesAT3G44480
GO:0008219 IEAPLAZA Integrative Orthologycell deathAT5G45260
GO:0009409 IEAPLAZA Integrative Orthologyresponse to coldAT1G17610
GO:0046713 IEAPLAZA Integrative Orthologyborate transportAT1G17610
GO:0009735 IEAPLAZA Integrative Orthologyresponse to cytokininAT5G46470
GO:0009615 IEAPLAZA Integrative Orthologyresponse to virusAT5G44870
GO:0042256 IEAPLAZA Integrative Orthologymature ribosome assemblyAT5G46470
GO:0042255 IEAPLAZA Integrative Orthologyribosome assemblyAT5G46470
GO:0080135 IEAPLAZA Integrative Orthologyregulation of cellular response to stressAT5G11250
GO:0009870 IEAPLAZA Integrative Orthologydefense response signaling pathway, resistance gene-dependentAT5G45250
GO:0034052 IEAPLAZA Integrative Orthologypositive regulation of plant-type hypersensitive responseAT1G47370

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAInterProprotein binding
GO:0043531 IEAInterProADP binding
GO:0003735 IEAPLAZA Integrative Orthologystructural constituent of ribosomeAT5G46470
GO:0003677 IEAPLAZA Integrative OrthologyDNA bindingAT5G45260
GO:0003729 IEAPLAZA Integrative OrthologymRNA bindingAT5G46470
GO:0043621 IEAPLAZA Integrative Orthologyprotein self-associationAT1G47370

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0012505 IEAPLAZA Integrative Orthologyendomembrane systemAT5G45250
GO:0016020 IEAPLAZA Integrative OrthologymembraneAT3G51570
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT4G16940
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G47370
GO:0042788 IEAPLAZA Integrative Orthologypolysomal ribosomeAT5G46470
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT3G44480
GO:0009941 IEAPLAZA Integrative Orthologychloroplast envelopeAT4G12020
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT3G44480
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT1G31540
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT5G46470
GO:0005789 IEAPLAZA Integrative Orthologyendoplasmic reticulum membraneAT3G44480
GO:0009579 IEAPLAZA Integrative OrthologythylakoidAT5G46470
GO:0009535 IEAPLAZA Integrative Orthologychloroplast thylakoid membraneAT5G46470
GO:0005774 IEAPLAZA Integrative Orthologyvacuolar membraneAT5G45050
GO:0000139 IEAPLAZA Integrative OrthologyGolgi membraneAT3G44480
GO:0022627 IEAPLAZA Integrative Orthologycytosolic small ribosomal subunitAT5G46470
GO:0022626 IEAPLAZA Integrative Orthologycytosolic ribosomeAT5G46470

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR000157Toll/interleukin-1 receptor homology (TIR) domain
IPR032675Leucine-rich repeat domain, L domain-like
IPR002182NB-ARC
IPR001611Leucine-rich repeat
IPR027417P-loop containing nucleoside triphosphate hydrolase

Mapman id Description
26.8.2.1.External stimuli response.pathogen.effector-triggered immunity (ETI) network.effector receptor (NLR)
No SignalP domains detected for this gene.