Gene: Potri.019G002500 (Populus trichocarpa)

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Gene Identifier
Potri.019G002500
Transcript Identifier
Potri.019G002500.1
Gene Type
Coding gene
Location
Chr19 : 293285-297909 : positive

Family

Gene family
HOM04M000050
(1385 genes in 23 species)
specific family
Duplication type
Tandem duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasPOPTR_0019s01640
idPotri.019G002500.v3.1
pacid37260461
tidPotri.019G002500.1.v3.1
tidPotri.019G002500.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0007165 IEAInterProsignal transduction
GO:0010114 IEAPLAZA Integrative Orthologyresponse to red lightAT5G17880
GO:0050832 IEAPLAZA Integrative Orthologydefense response to fungusAT1G63880
GO:0034644 IEAPLAZA Integrative Orthologycellular response to UVAT1G56510
GO:0002229 IEAPLAZA Integrative Orthologydefense response to oomycetesAT1G56510
GO:0009817 IEAPLAZA Integrative Orthologydefense response to fungus, incompatible interactionAT4G16990
GO:0009733 IEAPLAZA Integrative Orthologyresponse to auxinAT4G16890
GO:0009416 IEAPLAZA Integrative Orthologyresponse to light stimulusAT5G17880
GO:0042742 IEAPLAZA Integrative Orthologydefense response to bacteriumAT4G16890
GO:0006952 IEAPLAZA Integrative Orthologydefense responseAT1G63730
GO:0009861 IEAPLAZA Integrative Orthologyjasmonic acid and ethylene-dependent systemic resistanceAT4G16990
GO:0009862 IEAPLAZA Integrative Orthologysystemic acquired resistance, salicylic acid mediated signaling pathwayAT4G16890
GO:0034052 IEAPLAZA Integrative Orthologypositive regulation of plant-type hypersensitive responseAT1G47370
GO:2000071 IEAPLAZA Integrative Orthologyregulation of defense response by callose depositionAT4G16990

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAInterProprotein binding
GO:0043531 IEAInterProADP binding
GO:0000166 IEAPLAZA Integrative Orthologynucleotide bindingAT4G16950
GO:0043621 IEAPLAZA Integrative Orthologyprotein self-associationAT1G47370

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT4G16890
GO:0043231 IEAPLAZA Integrative Orthologyintracellular membrane-bounded organelleAT4G16890
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT4G16890
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT4G16890
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT5G40100
GO:0009941 IEAPLAZA Integrative Orthologychloroplast envelopeAT5G40100

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR032675Leucine-rich repeat domain, L domain-like
IPR000157Toll/interleukin-1 receptor homology (TIR) domain
IPR002182NB-ARC
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR011991Winged helix-turn-helix DNA-binding domain

Mapman id Description
26.8.2.1.External stimuli response.pathogen.effector-triggered immunity (ETI) network.effector receptor (NLR)
No SignalP domains detected for this gene.