Gene: Potri.018G099800 (Populus trichocarpa)

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Gene Identifier
Potri.018G099800
Transcript Identifier
Potri.018G099800.1
Gene Type
Coding gene
Location
Chr18 : 12790199-12792058 : negative

Family

Gene family
HOM04M000286
(363 genes in 27 species)
specific family
Subfamily
ORTHO04M000477
(200 genes in 27 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

Description
senescence-associated family protein; similar to senescence-associated protein 5 (Hemerocallis hybrid cultivar) gi|3551954|gb|AAC34855|; [ co-ortholog (2of2) of At4g30430, At4g28050, At2g23810, ]

Identifiers

Type Value
aliasPOPTR_0018s10880
aliasgw1.XVIII.3026.1
idPotri.018G099800.v3.1
pacid37246882
tidPotri.018G099800.1.v3.1
tidPotri.018G099800.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010015 IEAPLAZA Tree-based Orthologyroot morphogenesisAT5G46700
GO:0010305 IEAPLAZA Tree-based Orthologyleaf vascular tissue pattern formationAT5G46700
GO:0048527 IEAPLAZA Tree-based Orthologylateral root developmentAT2G03840
GO:0009933 IEAPLAZA Tree-based Orthologymeristem structural organizationAT5G46700
GO:0009934 IEAPLAZA Tree-based Orthologyregulation of meristem structural organizationAT5G46700
GO:0009956 IEAPLAZA Tree-based Orthologyradial pattern formationAT5G46700
GO:0009554 IEAPLAZA Tree-based OrthologymegasporogenesisAT5G46700
GO:0050829 IEAPLAZA Integrative Orthologydefense response to Gram-negative bacteriumAT2G23810
GO:0080022 IEAPLAZA Tree-based Orthologyprimary root developmentAT2G03840
GO:0035265 IEAPLAZA Tree-based Orthologyorgan growthAT3G12090

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016021 IEAInterProintegral component of membrane
GO:0016020 IEAPLAZA Integrative OrthologymembraneAT2G23810
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT2G23810
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT2G23810
GO:0005794 IEAPLAZA Integrative OrthologyGolgi apparatusAT2G23810

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR018499Tetraspanin/Peripherin
IPR018503Tetraspanin, conserved site

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.