Gene: Potri.017G082500 (Populus trichocarpa)

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Gene Identifier
Potri.017G082500
Transcript Identifier
Potri.017G082500.1
Gene Type
Coding gene
Location
Chr17 : 9783420-9784761 : positive

Family

Gene family
HOM04M000010
(3187 genes in 28 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
similar to myb family transcription factor (cY13); similar to myb protein cY13 GI:928930 from (Arabidopsis thaliana); similar to cDNA cY13 gene GI:928929; [ co-ortholog (1of2) of At5g62470, At1g74650, At3g47600, ]

Identifiers

Type Value
aliasgw1.XVII.1068.1
aliasPOPTR_0017s11880
aliasPt-MYB94.1
idPotri.017G082500.v3.1
pacid37225444
tidPotri.017G082500.1.v3.1
tidPotri.017G082500.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010025 IEAPLAZA Integrative Orthologywax biosynthetic processAT5G62470
GO:0010200 IEAPLAZA Integrative Orthologyresponse to chitinAT1G74650
GO:0010468 IEAPLAZA Integrative Orthologyregulation of gene expressionAT5G62470
GO:0001666 IEAPLAZA Integrative Orthologyresponse to hypoxiaAT3G28910
GO:0009737 IEAPLAZA Integrative Orthologyresponse to abscisic acidAT5G62470
GO:0009617 IEAPLAZA Integrative Orthologyresponse to bacteriumAT3G28910
GO:0009739 IEAPLAZA Integrative Orthologyresponse to gibberellinAT1G74650
GO:0009414 IEAPLAZA Integrative Orthologyresponse to water deprivationAT5G62470
GO:0009733 IEAPLAZA Integrative Orthologyresponse to auxinAT3G47600
GO:0009723 IEAPLAZA Integrative Orthologyresponse to ethyleneAT3G47600
GO:0009626 IEAPLAZA Integrative Orthologyplant-type hypersensitive responseAT3G28910
GO:0042761 IEAPLAZA Integrative Orthologyvery long-chain fatty acid biosynthetic processAT3G28910
GO:0009751 IEAPLAZA Integrative Orthologyresponse to salicylic acidAT1G74650
GO:0046686 IEAPLAZA Integrative Orthologyresponse to cadmium ionAT3G47600
GO:0009753 IEAPLAZA Integrative Orthologyresponse to jasmonic acidAT3G47600
GO:0080167 IEAPLAZA Integrative Orthologyresponse to karrikinAT3G47600
GO:0006355 IEAPLAZA Integrative Orthologyregulation of transcription, DNA-templatedAT5G62470
GO:0009651 IEAPLAZA Integrative Orthologyresponse to salt stressAT5G62470

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT3G28910

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT5G62470

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001005SANT/Myb domain
IPR017930Myb domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.2.1.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)
No SignalP domains detected for this gene.