Gene: Potri.016G115500 (Populus trichocarpa)

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Gene Identifier
Potri.016G115500
Transcript Identifier
Potri.016G115500.1
Gene Type
Coding gene
Location
Chr16 : 11991278-11994708 : negative

Family

Gene family
HOM04M000691
(187 genes in 28 species)
specific family
Subfamily
ORTHO04M000633
(167 genes in 28 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
similar to Ca2 /H exchanger. [ORG:Vigna radiata]; [ co-ortholog (1of2) of At5g01490, At3g51860, BAA25753, At2g38170, T07821, ]

Identifiers

Type Value
aliasPt-CAX3.2
aliasPOPTR_0016s12290
aliasgrail3.0025015501
idPotri.016G115500.v3.1
pacid37249387
tidPotri.016G115500.1.v3.1
tidPotri.016G115500.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0055085 IEAInterProtransmembrane transport
GO:0006812 IEAInterProcation transport
GO:0006816 IEAInterProcalcium ion transport
GO:0030026 IEAPLAZA Integrative Orthologycellular manganese ion homeostasisAT3G51860
GO:0051592 IEAPLAZA Integrative Orthologyresponse to calcium ionAT3G51860
GO:0006814 IEAPLAZA Integrative Orthologysodium ion transportAT3G51860
GO:0048364 IEAPLAZA Integrative Orthologyroot developmentAT5G01490
GO:0009733 IEAPLAZA Integrative Orthologyresponse to auxinAT5G01490
GO:0006874 IEAPLAZA Integrative Orthologycellular calcium ion homeostasisAT3G51860
GO:0009624 IEAPLAZA Integrative Orthologyresponse to nematodeAT3G51860
GO:0006793 IEAPLAZA Integrative Orthologyphosphorus metabolic processAT3G51860
GO:0009631 IEAPLAZA Integrative Orthologycold acclimationAT2G38170
GO:0006882 IEAPLAZA Integrative Orthologycellular zinc ion homeostasisAT3G51860
GO:0009651 IEAPLAZA Integrative Orthologyresponse to salt stressAT2G38170
GO:0010351 IEAPLAZA Integrative Orthologylithium ion transportAT3G51860
GO:0055062 IEAPLAZA Integrative Orthologyphosphate ion homeostasisAT3G51860

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008324 IEAInterProcation transmembrane transporter activity
GO:0015369 IEAInterProcalcium:proton antiporter activity
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT3G51860
GO:0015491 IEAPLAZA Integrative Orthologycation:cation antiporter activityAT5G01490
GO:0015085 IEAPLAZA Integrative Orthologycalcium ion transmembrane transporter activityAT2G38170
GO:0015368 IEAPLAZA Integrative Orthologycalcium:cation antiporter activityAT5G01490

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016021 IEAInterProintegral component of membrane
GO:0016020 IEAPLAZA Integrative OrthologymembraneAT2G38170
GO:0009705 IEAPLAZA Integrative Orthologyplant-type vacuole membraneAT3G51860
GO:0005773 IEAPLAZA Integrative OrthologyvacuoleAT3G51860
GO:0005774 IEAPLAZA Integrative Orthologyvacuolar membraneAT3G51860

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR004837Sodium/calcium exchanger membrane region
IPR004713Calcium/proton exchanger
IPR004798Calcium/proton exchanger CAX

Mapman id Description
24.2.9.1.1.Solute transport.carrier-mediated transport.CDF superfamily.CaCA family.cation antiporter (CAX)
No SignalP domains detected for this gene.