Gene: Potri.015G080400 (Populus trichocarpa)

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Gene Identifier
Potri.015G080400
Transcript Identifier
Potri.015G080400.2
Gene Type
Coding gene
Location
Chr15 : 10518386-10523352 : negative

Family

Gene family
HOM04M006941
(30 genes in 28 species)
specific family

Descriptions

Description
similar to transcription factor jumonji (jmjC) domain-containing protein; [ ortholog of At5g63080,]

Identifiers

Type Value
aliasfgenesh4_pg.C_LG_XV000553
aliasPOPTR_0015s09200
idPotri.015G080400.v3.1
pacid37255577
tidPotri.015G080400.2.v3.1
tidPotri.015G080400.2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0043985 IEAPLAZA Integrative Orthologyhistone H4-R3 methylationAT5G63080
GO:0010030 IEAPLAZA Integrative Orthologypositive regulation of seed germinationAT5G63080

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0033746 IEAPLAZA Integrative Orthologyhistone demethylase activity (H3-R2 specific)AT5G63080
GO:0000987 IEAPLAZA Integrative Orthologycore promoter proximal region sequence-specific DNA bindingAT5G63080
GO:0033749 IEAPLAZA Integrative Orthologyhistone demethylase activity (H4-R3 specific)AT5G63080

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT5G63080

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003347JmjC domain

Mapman id Description
12.3.3.9.7.Chromatin organisation.histone modifications.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (PKDM11)
15.5.29.RNA biosynthesis.transcriptional regulation.transcription factor (JUMONJI)
No SignalP domains detected for this gene.