Gene: Potri.015G063300 (Populus trichocarpa)

Overview top

Gene Identifier
Potri.015G063300
Transcript Identifier
Potri.015G063300.1
Gene Type
Coding gene
Location
Chr15 : 8702197-8703077 : negative

Family

Gene family
HOM04M000827
(161 genes in 24 species)
specific family
Subfamily
ORTHO04M003380
(56 genes in 22 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
bHLH family protein; [ co-ortholog (2of2) of At3g47710, At1g74500, ]

Identifiers

Type Value
aliasfgenesh4_pm.C_scaffold_129000006
aliasPOPTR_0015s07460
idPotri.015G063300.v3.1
pacid37255601
tidPotri.015G063300.1.v3.1
tidPotri.015G063300.1

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009416 IEAPLAZA Integrative Orthologyresponse to light stimulusAT1G26945
GO:0009741 IEAPLAZA Tree-based Orthologyresponse to brassinosteroidAT5G39860
GO:0009742 IEAPLAZA Integrative Orthologybrassinosteroid mediated signaling pathwayAT1G74500
GO:0080113 IEAPLAZA Tree-based Orthologyregulation of seed growthLOC_Os03g07510
GO:0048510 IEAPLAZA Integrative Orthologyregulation of timing of transition from vegetative to reproductive phaseAT3G47710
GO:0009640 IEAPLAZA Integrative OrthologyphotomorphogenesisAT3G47710
GO:0009826 IEAPLAZA Tree-based Orthologyunidimensional cell growthAT5G39860
GO:0010086 IEAPLAZA Integrative Orthologyembryonic root morphogenesisAT1G74500

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046983 IEAInterProprotein dimerization activity
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT1G74500

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005773 IEAPLAZA Tree-based OrthologyvacuoleAT5G15160
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT1G74500
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G74500

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR011598Myc-type, basic helix-loop-helix (bHLH) domain

Mapman id Description
15.5.32.RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)
No SignalP domains detected for this gene.