Gene: Potri.015G041600 (Populus trichocarpa)

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Gene Identifier
Potri.015G041600
Transcript Identifier
Potri.015G041600.1
Gene Type
Coding gene
Location
Chr15 : 3913360-3915130 : negative

Family

Gene family
HOM04M002403
(67 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
similar to GTP-binding protein beta chain - soybean. [ORG:Glycine max]; [ co-ortholog (1of2) of CAC09579, T06784, At1g48630, CAA69934, O24076, T09613, At3g18130, ]

Identifiers

Type Value
aliaseugene3.00150364
aliasPt-GBF1.2
aliasPOPTR_0015s04250
idPotri.015G041600.v3.1
pacid37255282
tidPotri.015G041600.1.v3.1
tidPotri.015G041600.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010476 IEAPLAZA Integrative Orthologygibberellin mediated signaling pathwayAT1G18080
GO:0050832 IEAPLAZA Tree-based Orthologydefense response to fungusLOC_Os01g49290
GO:0010228 IEAPLAZA Integrative Orthologyvegetative to reproductive phase transition of meristemAT1G18080
GO:0071215 IEAPLAZA Integrative Orthologycellular response to abscisic acid stimulusAT1G48630
GO:0048367 IEAPLAZA Integrative Orthologyshoot system developmentAT1G48630
GO:0009749 IEAPLAZA Integrative Orthologyresponse to glucoseAT1G18080
GO:0009739 IEAPLAZA Integrative Orthologyresponse to gibberellinAT1G18080
GO:0006417 IEAPLAZA Integrative Orthologyregulation of translationAT1G48630
GO:0048364 IEAPLAZA Integrative Orthologyroot developmentAT1G48630
GO:0009845 IEAPLAZA Integrative Orthologyseed germinationAT1G48630
GO:0009967 IEAPLAZA Integrative Orthologypositive regulation of signal transductionAT1G48630
GO:0046686 IEAPLAZA Integrative Orthologyresponse to cadmium ionAT1G18080
GO:0042254 IEAPLAZA Integrative Orthologyribosome biogenesisAT1G48630
GO:0060267 IEAPLAZA Tree-based Orthologypositive regulation of respiratory burstLOC_Os01g49290

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAInterProprotein binding
GO:0032947 IEAPLAZA Integrative Orthologyprotein complex scaffold activityAT1G18080
GO:0005078 IEAPLAZA Integrative OrthologyMAP-kinase scaffold activityAT1G48630

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT1G48630
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT1G18080
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT1G18080
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G48630
GO:0005886 IEAPLAZA Tree-based Orthologyplasma membraneLOC_Os01g49290
GO:0005730 IEAPLAZA Integrative OrthologynucleolusAT3G18130
GO:0022626 IEAPLAZA Integrative Orthologycytosolic ribosomeAT1G48630

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR015943WD40/YVTN repeat-like-containing domain
IPR001680WD40 repeat
IPR020472G-protein beta WD-40 repeat
IPR019775WD40 repeat, conserved site
IPR017986WD40-repeat-containing domain

Mapman id Description
17.1.3.1.33.Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.associated component RACK1
No SignalP domains detected for this gene.