Gene: Potri.015G033600 (Populus trichocarpa)

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Gene Identifier
Potri.015G033600
Transcript Identifier
Potri.015G033600.1
Gene Type
Coding gene
Location
Chr15 : 2784981-2786028 : negative

Family

Gene family
HOM04M000112
(760 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
similar to MYB transcription factor R2R3 type. [ORG:Populus tremula x Populus tremuloides]; [ co-ortholog (2of2) of At1g17950, At1g73410, At5g17800, CAD98761, ]

Identifiers

Type Value
aliasPt-MYB.38
aliasMYB090
aliasPOPTR_0015s05130
aliasgw1.122.261.1
idPotri.015G033600.v3.1
pacid37254704
tidPotri.015G033600.1.v3.1
tidPotri.015G033600.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009414 IEAPLAZA Integrative Orthologyresponse to water deprivationAT1G17950
GO:2000652 IEAPLAZA Integrative Orthologyregulation of secondary cell wall biogenesisAT1G73410
GO:0009834 IEAPLAZA Integrative Orthologyplant-type secondary cell wall biogenesisAT1G17950
GO:1901348 IEAPLAZA Integrative Orthologypositive regulation of secondary cell wall biogenesisAT1G17950
GO:1901347 IEAPLAZA Integrative Orthologynegative regulation of secondary cell wall biogenesisAT1G17950
GO:0009737 IEAPLAZA Integrative Orthologyresponse to abscisic acidAT1G17950
GO:1902074 IEAPLAZA Integrative Orthologyresponse to saltAT1G17950

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAUniProtDNA binding
GO:0044212 IEAPLAZA Integrative Orthologytranscription regulatory region DNA bindingAT1G73410

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G73410

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001005SANT/Myb domain
IPR017930Myb domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.2.1.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)
No SignalP domains detected for this gene.