Gene: Potri.013G141020 (Populus trichocarpa)

Overview top

Gene Identifier
Potri.013G141020
Transcript Identifier
Potri.013G141020.1
Gene Type
Coding gene
Location
Chr13 : 14831015-14831152 : positive

Family

Gene family
HOM04M004020
(44 genes in 16 species)
specific family
Subfamily
ORTHO04M009315
(25 genes in 16 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
idPotri.013G141020.v3.1
pacid37234512
tidPotri.013G141020.1.v3.1
tidPotri.013G141020.1

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009767 IEAInterProphotosynthetic electron transport chain
GO:0015979 IEAInterProphotosynthesis
GO:0019684 IEAInterProphotosynthesis, light reaction
GO:0009769 IEAPLAZA Tree-based Orthologyphotosynthesis, light harvesting in photosystem IIATCG00580

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0020037 IEAInterProheme binding
GO:0009055 IEAPLAZA Tree-based Orthologyelectron carrier activityATCG00580
GO:0046872 IEAPLAZA Homology (enrichment)metal ion binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009523 IEAInterProphotosystem II
GO:0009539 IEAInterProphotosystem II reaction center
GO:0016021 IEAInterProintegral component of membrane
GO:0009579 IEAPLAZA Tree-based OrthologythylakoidATCG00580
GO:0009535 IEAPLAZA Tree-based Orthologychloroplast thylakoid membraneATCG00580
GO:0009536 IEAPLAZA Tree-based OrthologyplastidHVU0342G0082
GO:0009654 IEAPLAZA Tree-based Orthologyphotosystem II oxygen evolving complexATCG00580
GO:0009534 IEAPLAZA Tree-based Orthologychloroplast thylakoidATCG00580
GO:0016020 IEAPLAZA Tree-based OrthologymembraneATCG00580
GO:0009507 IEAPLAZA Tree-based OrthologychloroplastATCG00580

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR006217Photosystem II cytochrome b559, alpha subunit
IPR013081Photosystem II cytochrome b559, N-terminal
IPR006216Photosystem II cytochrome b559, conserved site

Mapman id Description
1.1.1.2.1.5.1Photosynthesis.photophosphorylation.photosystem II.PS-II complex.reaction center complex.cytochrome b559 heterodimer.component alpha/PsbE
No SignalP domains detected for this gene.