Gene: Potri.013G068400 (Populus trichocarpa)

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Gene Identifier
Potri.013G068400
Transcript Identifier
Potri.013G068400.8
Gene Type
Coding gene
Location
Chr13 : 5513828-5538084 : negative

Family

Gene family
HOM04M000065
(1205 genes in 29 species)
specific family
Subfamily
ORTHO04M004573
(45 genes in 29 species)
specific family

Descriptions

Description
similar to SNF2 domain-containing protein; similar to helicase domain-containing protein; similar to SP|O14981|TBP associated-factor 172 TAF (172-TAF) (2(170){Homo) {sapiens} ; [ ortholog of At3g54280,]

Identifiers

Type Value
aliasestExt_fgenesh4_pg.C_LG_XIII0316
aliasCHR920
aliasPOPTR_0013s06470
aliasPOPTR_0013s06480
idPotri.013G068400.v3.1
pacid37232837
tidPotri.013G068400.8.v3.1
tidPotri.013G068400.8

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:1902185 IEAPLAZA Integrative Orthologypositive regulation of shoot apical meristem developmentAT3G54280

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005524 IEAInterProATP binding
GO:0005488 IEAInterProbinding

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR011989Armadillo-like helical
IPR001650Helicase, C-terminal
IPR000330SNF2-related, N-terminal domain
IPR022707Domain of unknown function DUF3535
IPR014001Helicase superfamily 1/2, ATP-binding domain
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR016024Armadillo-type fold

Mapman id Description
12.4.1.4.2.Chromatin organisation.chromatin remodeling complexes.ATPase modules.SSO1653-like group.chromatin remodeling factor (Mot1)
15.3.5.7.2.RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TATA box-binding protein (TBP) regulation.TBP-associated factor (MOT1)
No SignalP domains detected for this gene.