Gene: Potri.012G006400 (Populus trichocarpa)

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Gene Identifier
Potri.012G006400
Transcript Identifier
Potri.012G006400.1
Gene Type
Coding gene
Location
Chr12 : 555781-558407 : negative

Family

Gene family
HOM04M000095
(886 genes in 28 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
similar to Chain A; similar to Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic Acid 35-O-Methyltransferase Ferulic Acid Complex. [ORG:Medicago sativa]; [ co-ortholog (1of2) of CAA58218, 1KYW_C, 1KYZ_A, At5g54160, ]

Identifiers

Type Value
aliasPt-OMT1.1
aliasestExt_fgenesh4_pm.C_LG_XII0129
aliasCOMT2
aliasPOPTR_0012s00670
idPotri.012G006400.v3.1
pacid37281617
tidPotri.012G006400.1.v3.1
tidPotri.012G006400.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0042343 IEAPLAZA Integrative Orthologyindole glucosinolate metabolic processAT1G21100
GO:0051555 IEAPLAZA Integrative Orthologyflavonol biosynthetic processAT5G54160
GO:0009759 IEAPLAZA Integrative Orthologyindole glucosinolate biosynthetic processAT1G76790
GO:0009809 IEAPLAZA Integrative Orthologylignin biosynthetic processAT5G54160

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008171 IEAUniProtO-methyltransferase activity
GO:0046983 IEAUniProtprotein dimerization activity
GO:0008168 IEAUniProtmethyltransferase activity
GO:0030744 IEAPLAZA Integrative Orthologyluteolin O-methyltransferase activityAT5G54160
GO:0030755 IEAPLAZA Integrative Orthologyquercetin 3-O-methyltransferase activityAT5G54160
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT1G21100
GO:0047763 IEAPLAZA Integrative Orthologycaffeate O-methyltransferase activityAT5G54160
GO:0017096 IEAPLAZA Integrative Orthologyacetylserotonin O-methyltransferase activityAT1G76790
GO:0033799 IEAPLAZA Integrative Orthologymyricetin 3'-O-methyltransferase activityAT5G54160

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT5G54160
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT5G54160
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT5G54160
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT5G54160
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT1G51990

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR011991Winged helix-turn-helix DNA-binding domain
IPR001077O-methyltransferase, family 2
IPR012967Plant methyltransferase dimerisation
IPR016461O-methyltransferase COMT-type
IPR029063S-adenosyl-L-methionine-dependent methyltransferase

Mapman id Description
21.6.1.7.Cell wall organisation.lignin.monolignol biosynthesis.caffeic acid O-methyltransferase (COMT)
No SignalP domains detected for this gene.