Gene: Potri.011G145000 (Populus trichocarpa)

Overview top

Gene Identifier
Potri.011G145000
Transcript Identifier
Potri.011G145000.1
Gene Type
Coding gene
Location
Chr11 : 16517505-16520142 : positive

Family

Gene family
HOM04M001238
(117 genes in 27 species)
specific family
Subfamily
ORTHO04M001616
(90 genes in 27 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
similar to 3-hydroxy-3-methylglutaryl coenzyme A reductase. [ORG:Malus x domestica]; [ co-ortholog (3of4) of AAK64657, AAL03987, AAK95406, AAA33359, AAQ54556, S22521, P29058, AAD09278, CAA38468, BAA09705, Q00583, AAM19212, T10099, AAL03986, S14953, AAK954

Identifiers

Type Value
aliasPt-HMGR3.2
aliasPOPTR_0011s14810
aliasestExt_fgenesh4_pm.C_LG_XI0390
idPotri.011G145000.v3.1
pacid37239234
tidPotri.011G145000.1.v3.1
tidPotri.011G145000.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008299 IEAInterProisoprenoid biosynthetic process
GO:0055114 IEAInterProoxidation-reduction process
GO:0015936 IEAInterProcoenzyme A metabolic process
GO:0016104 IEAPLAZA Integrative Orthologytriterpenoid biosynthetic processAT2G17370
GO:0016126 IEAPLAZA Integrative Orthologysterol biosynthetic processAT2G17370
GO:0019287 IEAPLAZA Tree-based Orthologyisopentenyl diphosphate biosynthetic process, mevalonate pathwayAT1G76490
GO:0006333 IEAPLAZA Tree-based Orthologychromatin assembly or disassemblyAT1G76490

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004420 IEAInterProhydroxymethylglutaryl-CoA reductase (NADPH) activity
GO:0050661 IEAInterProNADP binding
GO:0050662 IEAInterProcoenzyme binding
GO:0016616 IEAInterProoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0042282 IEAPLAZA Tree-based Orthologyhydroxymethylglutaryl-CoA reductase activityAT1G76490
GO:0005515 IEAPLAZA Tree-based Orthologyprotein bindingAT1G76490
GO:0030527 IEAPLAZA Tree-based Orthologystructural constituent of chromatinAT1G76490
GO:0003677 IEAPLAZA Tree-based OrthologyDNA bindingAT1G76490
GO:0003682 IEAPLAZA Tree-based Orthologychromatin bindingAT1G76490

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016021 IEAInterProintegral component of membrane
GO:0016020 IEAPLAZA Tree-based OrthologymembraneAT1G76490
GO:0043231 IEAPLAZA Integrative Orthologyintracellular membrane-bounded organelleAT2G17370
GO:0005777 IEAPLAZA Tree-based OrthologyperoxisomeAT1G76490
GO:0005789 IEAPLAZA Tree-based Orthologyendoplasmic reticulum membraneAT1G76490
GO:0009536 IEAPLAZA Tree-based OrthologyplastidAT1G76490
GO:0000785 IEAPLAZA Tree-based OrthologychromatinAT1G76490
GO:0005783 IEAPLAZA Tree-based Orthologyendoplasmic reticulumAT1G76490

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR004554Hydroxymethylglutaryl-CoA reductase, eukaryotic/archaeal type
IPR023282Hydroxymethylglutaryl-CoA reductase, N-terminal
IPR023074Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain
IPR009023Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain
IPR002202Hydroxymethylglutaryl-CoA reductase, class I/II
IPR023076Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site
IPR009029Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain

Mapman id Description
9.1.1.3.Secondary metabolism.terpenoids.mevalonate pathway.3-hydroxy-3-methylglutaryl-CoA reductase
No SignalP domains detected for this gene.