Gene: Potri.011G141200 (Populus trichocarpa)

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Gene Identifier
Potri.011G141200
Transcript Identifier
Potri.011G141200.4
Gene Type
Coding gene
Location
Chr11 : 16298348-16300360 : positive

Family

Gene family
HOM04M006411
(32 genes in 25 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
idPotri.011G141200.v3.1
pacid37241529
tidPotri.011G141200.4.v3.1
tidPotri.011G141200.4

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0000724 IEAInterProdouble-strand break repair via homologous recombination
GO:0045931 IEAPLAZA Integrative Orthologypositive regulation of mitotic cell cycleAT3G15150
GO:0032876 IEAPLAZA Integrative Orthologynegative regulation of DNA endoreduplicationAT3G15150
GO:0006974 IEAPLAZA Integrative Orthologycellular response to DNA damage stimulusAT3G15150
GO:0080038 IEAPLAZA Integrative Orthologypositive regulation of cytokinin-activated signaling pathwayAT3G15150
GO:0008284 IEAPLAZA Integrative Orthologypositive regulation of cell proliferationAT3G15150
GO:0060250 IEAPLAZA Integrative Orthologygerm-line stem-cell niche homeostasisAT3G15150
GO:0016925 IEAPLAZA Integrative Orthologyprotein sumoylationAT3G15150
GO:0010082 IEAPLAZA Integrative Orthologyregulation of root meristem growthAT3G15150
GO:0048509 IEAPLAZA Integrative Orthologyregulation of meristem developmentAT3G15150

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0019789 IEAInterProSUMO transferase activity
GO:0008270 IEAInterProzinc ion binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT3G15150

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0030915 IEAInterProSmc5-Smc6 complex
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT3G15150

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR026846E3 SUMO-protein ligase Nse2 (Mms21)
IPR004181Zinc finger, MIZ-type

Mapman id Description
14.3.6.1.3.DNA damage response.homologous recombination repair (HR).Smc5-Smc6 complex.NSE2-SMC5-SMC6 subcomplex.SUMO-ligase component NSE2
19.2.2.2.4.2.Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.SUMO conjugation (sumoylation).SUMO E3 ligase activities.E3 ligase (HPY2)
No SignalP domains detected for this gene.